| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is purP [H]
Identifier: 126453684
GI number: 126453684
Start: 2921542
End: 2922918
Strand: Direct
Name: purP [H]
Synonym: BURPS1106A_2977
Alternate gene names: 126453684
Gene position: 2921542-2922918 (Clockwise)
Preceding gene: 126455345
Following gene: 126453119
Centisome position: 73.25
GC content: 67.1
Gene sequence:
>1377_bases ATGGACCTCTATCAAGGCACCGCCGCGCCCGCGAAGCGCTCGGCGCTCGAGCGCCACTTCGGCATCCGCGAGTCCGGCTC GCGGCTGCGCACCGAGATCGTCGCCGGCGTGACGACATTCCTCACCGCGATGTACATCATCGTCGTGAATCCCGGCATCC TGTCGCAGGCGGGCGTGCCGTTCGCAGCCGCGCTCACGGCGACCGTGATCGTCAGCTTCCTCGGCAGTTGCGCGATGGGC CTGTACGCGCGCAATCCGGTGCTCGTCGCGCCGGGCATGGGAATGAACGCGCTCTTCACGTTCGTGATGGTCCACGGCGG CAAGATGCCGTGGCAAACCGCGCTCGGCTGCGTGTTCTGGGCAGGCGTGCTATTCGCGACACTCGCCGCGTTCAATGCGC GCAAGCTCGTCGTCGACGCGATTCCGGCGAACCTGCGGCATGCGGTGTCGTGCGGCATCGGCCTGTTCATCAGCCTGATC GGGCTCGTGAACGCGAAGTTCATCGTCGGCGATCCGGTGACGATCGTTCACGCGACGTCGCTCAACCCGGTGATCGTCAC GTTTCTCGCCGGCCTCGCGGTCACGACCGTGCTCGTCGTGCGCCGCGTGACGGGCGCGCTGATGCTCGGCATCGTCGCGA CGACGCTGCTCGCGATCCCGATCGGCCGCGTGTGGGGCGACGGCAGCGCGTACTGGCCCGCCGCGATCGCGACGAAGACG CTCGTCAACTGGAACGGCCTCGTTGCCGCGCCGGATTTCTCCGCGCTCGGCCAGCTCGATCTGCTCGGCTCGCTGAAGGT CGCGTACTGGCCGTTCATCTTCGTGATGCTGTTCACCGCGTTCTTCGACGCGCTCTCGACGTTCATGGCGATCTCGGAGG CGGGCAACCTGCGCGACCGCGACGGCAATCCGCGCAACATCCGCCAATCGATGATCGTCGACGCGTTCTCGGCCGTCGTG TCCGCGCCGCTCGGCACGAGCCCCGCGAACGCGTACATCGAATCGGCGGCCGGCATCTCGGCGGGCGGCCGCACGGGGCT CGTCGCGGTGGTCGCGGGCTTGTGCTTCGTGCCGTTCCTGTTCCTGTCGCCGCTGCTCTCGCTCGTGCCGGCGATCGCGA CGGCGCCCGCGCTCGTGCTCGTCGGCGTATTCATGATGGAATCGATCACGAAGATCGAATGGCACCGCTTCGACGAGGCG ATCCCCGCGTTTCTCGCGATGATCCTGATACCGCTCACATACTCGATCACCGAAGGCATCGCATACGGCTTTCTCGCGTT CGTCGTGCTCAAGCTCTTCACCGGCCGCCGCGGCGACGTGAAGCCCGCGATGTGGGTGGTCGCCGCGCTGTCGCTGCTGC TCGTCGCACAACTCTGA
Upstream 100 bases:
>100_bases TGACGGCCGCGCAACGCGCGCGCCCCGCATGCGGCGGCGCGCGAAGCGCGCGCGTTGCGACGCGTTGCGCTCGACACGAG ACACTGAGGAGAGCTTAACG
Downstream 100 bases:
>100_bases TTTCAATCGATACGGATTCCCCACGATGACTCAAACCGCTTTCCGCGCCCGCCTGCTGAGGTTCGACGGCGACCCCGCGC AATCGGACGATGCGCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVPFAAALTATVIVSFLGSCAMG LYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLFISLI GLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTLLAIPIGRVWGDGSAYWPAAIATKT LVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLRDRDGNPRNIRQSMIVDAFSAVV SAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHRFDEA IPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVAQL
Sequences:
>Translated_458_residues MDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVPFAAALTATVIVSFLGSCAMG LYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLFISLI GLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTLLAIPIGRVWGDGSAYWPAAIATKT LVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLRDRDGNPRNIRQSMIVDAFSAVV SAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHRFDEA IPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVAQL >Mature_458_residues MDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVPFAAALTATVIVSFLGSCAMG LYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLFISLI GLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTLLAIPIGRVWGDGSAYWPAAIATKT LVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLRDRDGNPRNIRQSMIVDAFSAVV SAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHRFDEA IPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVAQL
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=453, Percent_Identity=39.514348785872, Blast_Score=314, Evalue=9e-87, Organism=Escherichia coli, GI87082309, Length=441, Percent_Identity=38.3219954648526, Blast_Score=292, Evalue=3e-80, Organism=Escherichia coli, GI1790499, Length=436, Percent_Identity=36.9266055045872, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI48994909, Length=443, Percent_Identity=36.568848758465, Blast_Score=238, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 48295; Mature: 48295
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVP CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC FAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFW HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLFISLIGLVNAKFIVGDPVTIVHATS HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECC LNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTLLAIPIGRVWGDGSAYWPAAIATKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLRDR HCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFL CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH FLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHRFDEAIPAFLAMILIPLTYSITEGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVAQL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQAGVP CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC FAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFW HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLFISLIGLVNAKFIVGDPVTIVHATS HHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECC LNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTLLAIPIGRVWGDGSAYWPAAIATKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGNLRDR HCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFL CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH FLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHRFDEAIPAFLAMILIPLTYSITEGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVAQL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]