| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453654
Identifier: 126453654
GI number: 126453654
Start: 1981570
End: 1982466
Strand: Direct
Name: 126453654
Synonym: BURPS1106A_2018
Alternate gene names: NA
Gene position: 1981570-1982466 (Clockwise)
Preceding gene: 126452580
Following gene: 126454562
Centisome position: 49.68
GC content: 67.0
Gene sequence:
>897_bases ATGTCGGAGCCCATGCGTTCACTCATCCCGGCCGCGCGAACGGCGTCGGGCATCTCGTACTGCTCGTTCGGCGAACTGCT GCAGGGCGTGCTGCTCGAGGACGACGCCGATTTTCTCGTCACGCTGCCGATCCAGAAATACTCGGTGAGCACGTTCGTGC CGGACCCCGGCAGCACCGAGATCGTCACGCAGCCGAGCGGCAAGACGAAGGCCGCGGCGCTCGCGAAGGTGATTCTCGGG CGCTACGGGCACAACGTCGGCGGGACGTTCTACATCGACTGCGACATCCCGATCGGCAAGGGGCTCAGCAGCTCGTCCGC CGACCTGCTCGCGACCGCGCGCGCGATCGAGGTCTACATGGGCCGCGAGCTGCCGCTCGGCGAGCTGTGCCGCGACATGA GCGGCATCGAGCCGACCGACGGCGTGATGTTCGCGGAATCGGTCGTCTACCTGCAGCGCAAGGGGGTGCTGTGGTCGCGG CTCGGGCGCCTGTCCGGCATCCAGATCCTGTCGCTCGACGAGGGCGGCACGATCGACACGCTCGAGTATCACCGCCGCGC GCGCGCGCATCGGCACAACGCCGAGCATCGCAGCGAGTTCAACGAACTGCTCGAGCGGATCGTCGCGGCGTTCGGCGCGC GCGATCTCGACGAGATCGGCAGGGTGTCGACCCGCAGCGCGTACATCAACCAGAAGATCAATCCGAAGCGCCATCTGGCC TCGGTTCACGACGTATGCCAGGCGACGCGGGGGCTCGGGCTCGTGACGGCGCACAGCGGCACGTGCATCGGCATCCTGTA CGAAACCGGGCGGGCGGGGCACCGCGAAAACCTCGCGCGGGCAGCCGATGCGCTCTCGGGATACGGAAACATCAAGGTCT ATGACACGATCCAATAG
Upstream 100 bases:
>100_bases ACGGCTCGTGCGGCGACCAGGCGCTCGGCGAGCTGCTCGCGCAGCTTCGCTCGATGCTGGACGCGCATCGTCTCGGCCGA TGACCGCTCGAGCACTGGCC
Downstream 100 bases:
>100_bases CCGCCGCGCCCGCGCGGCCGAACCGCAGCCGCTTCGCTTCGGCAAGGACGACCATGCCATTTTCTGAATCCGTCGCCGAC GCGCCGAGCGCCGTCGAGGC
Product: GHMP kinase ATP-binding subunit
Products: NA
Alternate protein names: Kinase; Ghmp Kinase; PduX-Like Protein; L-Threonine Kinase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTEIVTQPSGKTKAAALAKVILG RYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYMGRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSR LGRLSGIQILSLDEGGTIDTLEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ
Sequences:
>Translated_298_residues MSEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTEIVTQPSGKTKAAALAKVILG RYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYMGRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSR LGRLSGIQILSLDEGGTIDTLEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ >Mature_297_residues SEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTEIVTQPSGKTKAAALAKVILGR YGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYMGRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSRL GRLSGIQILSLDEGGTIDTLEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLAS VHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32321; Mature: 32190
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTE CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCE IVTQPSGKTKAAALAKVILGRYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYM EEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH GRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSRLGRLSGIQILSLDEGGTIDT CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCH LEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCHHHHHH SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ HHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure SEPMRSLIPAARTASGISYCSFGELLQGVLLEDDADFLVTLPIQKYSVSTFVPDPGSTE CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCE IVTQPSGKTKAAALAKVILGRYGHNVGGTFYIDCDIPIGKGLSSSSADLLATARAIEVYM EEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH GRELPLGELCRDMSGIEPTDGVMFAESVVYLQRKGVLWSRLGRLSGIQILSLDEGGTIDT CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCH LEYHRRARAHRHNAEHRSEFNELLERIVAAFGARDLDEIGRVSTRSAYINQKINPKRHLA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCHHHHHH SVHDVCQATRGLGLVTAHSGTCIGILYETGRAGHRENLARAADALSGYGNIKVYDTIQ HHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA