| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454562
Identifier: 126454562
GI number: 126454562
Start: 1982520
End: 1983752
Strand: Direct
Name: 126454562
Synonym: BURPS1106A_2019
Alternate gene names: NA
Gene position: 1982520-1983752 (Clockwise)
Preceding gene: 126453654
Following gene: 126452989
Centisome position: 49.71
GC content: 64.07
Gene sequence:
>1233_bases ATGCCATTTTCTGAATCCGTCGCCGACGCGCCGAGCGCCGTCGAGGCCGGGTATGCGCTCAGCACGCGAAACGTGCGCAT CTACCTCGCGTACCGGGTGCTCACGCTCGCGATCATCGATCGCGCGATCTTCGTCATCTTCCTGATGCACAAGGGCTTCG ACGCGTATCAGATCGGCATCCTGCAGGGCGTGTTCTTTCTCGCGAACATCGTGACCGAAGTGCCCGCCGGCATGTTCGGC GATGCGTTCGGGCGCAAGCGCTCGGTGCTGCTCGGGCTCGTCGCGTATTGCGCGTACGCGCTCGGCGTCATCGCGAGCGA CGGCTTCGTGCCGTTCGTCTGTCTGTACGCGCTCCTCGGCGTCGCGCTCGCGCTCGTGTACGGCTCGGACACCGCGCTGC TCTACGACAGCCTCGTCGTCGACGGCCGCGTCGCGCATTTCAACCGGGTGCAGTTGCGCGCGAACGCGCTCGGCCTGATC TCCGGCGCGTTCGCCGTGCTCGCGGGCGGCCTGCTGCAGAAGGTGTCGTGGAACGCCGTCTATGCCGCGTATTTCGCGAT CTACGCGGCGGCGCTCGGCGCGTGGTGCCTCGCGATCGAGCCGCCCGAGGCTTCGGCGGAACTGAGCGCGGGGCGCAAGG ACGTGACGAAGGAGCTGTTCGCGTTCATCCGCGGACACTGGAGAAGCGTCGCGCTGCCGATCCTCGGCTTCACCGTGTTC GCCGCCTGCACGACGCCGTTCTTCACGTTCAGCCAGGCGCTCTTCAAGGAGAACGGCTTCAGCGTCGAGCACATCACGTG GTTCTTCTTCGCCGCGCAGATGCTGATCGGCTTCGTGTATCTCGTGATGCAGCGGACCATGTCGTTTCTCGGCTTCTATC CGGTCGTGCTCGCGAGCACGCTGCTGACCGCGATCGTGCTCGCGGCGATGTTCTTCAACGTCGCGGCCGTCGATTTCACC GGCTTCTTCCTCGTCATGATCATCAATCCGATCGTCACGGTCGTCGCCAACGAATACTTCAACAAGCGTCTGCCGAGCCG GATCCGCGCGTCGTTCCTGTCGCTGATCGGGCTGTGCATGTCGCTCACGATCGCCGTGATGTATTTCCTTTACAGCTATC TCGCGCAGTACCTGGCGATCTACAAGGTGATGGCGTCGACGTCGCTGATCGCCGCGTGCGCGTGCGCGATCTTCGTCGTC GCACGCTGCGTCGACACGAAGGAGCAAGCATGA
Upstream 100 bases:
>100_bases CGCTCTCGGGATACGGAAACATCAAGGTCTATGACACGATCCAATAGCCGCCGCGCCCGCGCGGCCGAACCGCAGCCGCT TCGCTTCGGCAAGGACGACC
Downstream 100 bases:
>100_bases TGCTGCGCCGTCTGCTGTACCGCGAAACGCCGTTCGAGCCGCTCACCGACGCCGAGCTGCGCCGCCTCGAGGCGGCGTTC GGCGAAATGGTCGCGGGCAA
Product: major facilitator family transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGILQGVFFLANIVTEVPAGMFG DAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLGVALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLI SGAFAVLAGGLLQKVSWNAVYAAYFAIYAAALGAWCLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLASTLLTAIVLAAMFFNVAAVDFT GFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCMSLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVV ARCVDTKEQA
Sequences:
>Translated_410_residues MPFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGILQGVFFLANIVTEVPAGMFG DAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLGVALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLI SGAFAVLAGGLLQKVSWNAVYAAYFAIYAAALGAWCLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLASTLLTAIVLAAMFFNVAAVDFT GFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCMSLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVV ARCVDTKEQA >Mature_409_residues PFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGILQGVFFLANIVTEVPAGMFGD AFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLGVALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLIS GAFAVLAGGLLQKVSWNAVYAAYFAIYAAALGAWCLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVFA ACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLASTLLTAIVLAAMFFNVAAVDFTG FFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCMSLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVVA RCVDTKEQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44668; Mature: 44537
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGI CCCCCCCCCCCHHHHCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LQGVFFLANIVTEVPAGMFGDAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLG HHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLISGAFAVLAGGLLQKVSWNAV HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAAYFAIYAAALGAWCLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF HHHHHHHHHHHHHHHHEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLAST HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTAIVLAAMFFNVAAVDFTGFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH SLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVVARCVDTKEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PFSESVADAPSAVEAGYALSTRNVRIYLAYRVLTLAIIDRAIFVIFLMHKGFDAYQIGI CCCCCCCCCCHHHHCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LQGVFFLANIVTEVPAGMFGDAFGRKRSVLLGLVAYCAYALGVIASDGFVPFVCLYALLG HHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VALALVYGSDTALLYDSLVVDGRVAHFNRVQLRANALGLISGAFAVLAGGLLQKVSWNAV HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAAYFAIYAAALGAWCLAIEPPEASAELSAGRKDVTKELFAFIRGHWRSVALPILGFTVF HHHHHHHHHHHHHHHHEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AACTTPFFTFSQALFKENGFSVEHITWFFFAAQMLIGFVYLVMQRTMSFLGFYPVVLAST HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTAIVLAAMFFNVAAVDFTGFFLVMIINPIVTVVANEYFNKRLPSRIRASFLSLIGLCM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH SLTIAVMYFLYSYLAQYLAIYKVMASTSLIAACACAIFVVARCVDTKEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA