| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is paaF [C]
Identifier: 126453598
GI number: 126453598
Start: 674947
End: 675789
Strand: Direct
Name: paaF [C]
Synonym: BURPS1106A_0698
Alternate gene names: 126453598
Gene position: 674947-675789 (Clockwise)
Preceding gene: 126454517
Following gene: 126451820
Centisome position: 16.92
GC content: 67.5
Gene sequence:
>843_bases ATGACGACGGTGCGCGGGCGACGAGCTCGCGCACCGTTTTTTGTTGATCGAATGAAACCAGCCACGGAGACGGCTCAAAT GGATATCCAGATCGAAAACGCAGGCGGCGTGCTGACGATCACGCTCGCGCGCCCGGCGAAGAAGAACGCGATCACGGCGG CGATGTACCAGACGATGGCCGATGCGCTCGCGGCGGCGCAGGACGACAAATCGGTGCGCGCGATCCTGATTCGCGGCAGC GATGGCAACTTCAGCGCGGGCAACGATCTCGACGATTTCATGAAGGCGCCGCCGAAGGACGAGCACGCGCCCGTGTTCCA GTTCCTGCGCCAGATCGCCGGCGCGCACAAGCCGATCGTCGCGGCGGTCGCGGGCGTCGCCGTCGGCATCGGCGTGACGA TGCTGCTGCACTGCGATCTCGTCTACGCGGCCGACACCGCGCAGCTGTCGCTGCCGTTCGCGCAGCTCGGCCTGTGCCCG GAGGCGGCATCGAGCCTGTTGCTGCCGCGCGTCGCCGGTCATCAGGTGGCCGCGGAGAAACTGCTGCTCGGCGAGCCGTT CGACGCGCTCGAGGCGCACCGCATCGGCCTCGTGAACCGCGTGCTGCCCGCCGCGGATCTCGACGCGTTCGCCGCGCAGC AGGCGGCCAAGCTCGTCGCGCTGCCGGCTTCGTCGCTGCGCGCGACGAAGGCGTTCCTCAAGAAGGGCAGCGCCGCGGAC ATCGCCGCGCGGATGTCGGAAGAGGGGGATCAGTTCGGCAAGATGCTGCGCTCGCCCGAGGTGCGTGAGGCGATCACCGC GTTTTTCGAGAAGCGCAAGCCGGATTTCTGGCAATTCGACTGA
Upstream 100 bases:
>100_bases CGCCGCCGCAACCTGAAGTACGGGATGGTGACGATGTGCGTCGGCACCGGCATGGGCGCGGCGGGCATCATCGAGCGCCT CTGATCGGAGCGCGCGACGG
Downstream 100 bases:
>100_bases GCGCCGCGGCGGCGCGATGCGGTGCGGCGGCTTGCGGGCCGCCGCGCGCGCATGAAGCCCGACGCGTCGGCTCGCCGCCC GCCGTGCCGCTTGCGCGTGG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTTVRGRRARAPFFVDRMKPATETAQMDIQIENAGGVLTITLARPAKKNAITAAMYQTMADALAAAQDDKSVRAILIRGS DGNFSAGNDLDDFMKAPPKDEHAPVFQFLRQIAGAHKPIVAAVAGVAVGIGVTMLLHCDLVYAADTAQLSLPFAQLGLCP EAASSLLLPRVAGHQVAAEKLLLGEPFDALEAHRIGLVNRVLPAADLDAFAAQQAAKLVALPASSLRATKAFLKKGSAAD IAARMSEEGDQFGKMLRSPEVREAITAFFEKRKPDFWQFD
Sequences:
>Translated_280_residues MTTVRGRRARAPFFVDRMKPATETAQMDIQIENAGGVLTITLARPAKKNAITAAMYQTMADALAAAQDDKSVRAILIRGS DGNFSAGNDLDDFMKAPPKDEHAPVFQFLRQIAGAHKPIVAAVAGVAVGIGVTMLLHCDLVYAADTAQLSLPFAQLGLCP EAASSLLLPRVAGHQVAAEKLLLGEPFDALEAHRIGLVNRVLPAADLDAFAAQQAAKLVALPASSLRATKAFLKKGSAAD IAARMSEEGDQFGKMLRSPEVREAITAFFEKRKPDFWQFD >Mature_279_residues TTVRGRRARAPFFVDRMKPATETAQMDIQIENAGGVLTITLARPAKKNAITAAMYQTMADALAAAQDDKSVRAILIRGSD GNFSAGNDLDDFMKAPPKDEHAPVFQFLRQIAGAHKPIVAAVAGVAVGIGVTMLLHCDLVYAADTAQLSLPFAQLGLCPE AASSLLLPRVAGHQVAAEKLLLGEPFDALEAHRIGLVNRVLPAADLDAFAAQQAAKLVALPASSLRATKAFLKKGSAADI AARMSEEGDQFGKMLRSPEVREAITAFFEKRKPDFWQFD
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI45643119, Length=267, Percent_Identity=32.9588014981273, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI260275230, Length=267, Percent_Identity=32.9588014981273, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI260274832, Length=267, Percent_Identity=32.9588014981273, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI194097323, Length=285, Percent_Identity=29.4736842105263, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI31542718, Length=280, Percent_Identity=28.9285714285714, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4757968, Length=257, Percent_Identity=26.4591439688716, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI49355787, Length=257, Percent_Identity=26.4591439688716, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI25453481, Length=271, Percent_Identity=25.4612546125461, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI51538573, Length=271, Percent_Identity=25.4612546125461, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI4757966, Length=252, Percent_Identity=26.1904761904762, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI51538581, Length=252, Percent_Identity=26.1904761904762, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI68989263, Length=262, Percent_Identity=29.0076335877863, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI70995211, Length=182, Percent_Identity=31.3186813186813, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI150378541, Length=247, Percent_Identity=29.1497975708502, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI4502327, Length=272, Percent_Identity=27.9411764705882, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI221136756, Length=257, Percent_Identity=22.9571984435798, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI221136753, Length=257, Percent_Identity=22.9571984435798, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI221307494, Length=257, Percent_Identity=22.9571984435798, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI116235487, Length=215, Percent_Identity=26.9767441860465, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI37594469, Length=164, Percent_Identity=29.8780487804878, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI37594471, Length=164, Percent_Identity=29.8780487804878, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI62530384, Length=234, Percent_Identity=23.9316239316239, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI157694516, Length=263, Percent_Identity=21.6730038022814, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI213417737, Length=263, Percent_Identity=21.6730038022814, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787659, Length=243, Percent_Identity=32.9218106995885, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1787660, Length=248, Percent_Identity=33.8709677419355, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788597, Length=260, Percent_Identity=31.9230769230769, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI221142681, Length=257, Percent_Identity=33.4630350194552, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87082183, Length=256, Percent_Identity=26.5625, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1790281, Length=232, Percent_Identity=25.4310344827586, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1788682, Length=204, Percent_Identity=25.9803921568627, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17535521, Length=253, Percent_Identity=33.596837944664, Blast_Score=130, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17549921, Length=214, Percent_Identity=36.4485981308411, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17554946, Length=280, Percent_Identity=31.0714285714286, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25145438, Length=248, Percent_Identity=30.241935483871, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17540306, Length=241, Percent_Identity=28.2157676348548, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560910, Length=204, Percent_Identity=29.9019607843137, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17540714, Length=225, Percent_Identity=25.3333333333333, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17534483, Length=210, Percent_Identity=24.7619047619048, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17558304, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536985, Length=200, Percent_Identity=26, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508953, Length=211, Percent_Identity=30.3317535545024, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25144276, Length=211, Percent_Identity=30.3317535545024, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17508951, Length=211, Percent_Identity=30.3317535545024, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654903, Length=256, Percent_Identity=31.25, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI20129971, Length=277, Percent_Identity=29.9638989169675, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24653477, Length=277, Percent_Identity=29.9638989169675, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24653139, Length=253, Percent_Identity=31.6205533596838, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI19922422, Length=253, Percent_Identity=25.296442687747, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI21357171, Length=220, Percent_Identity=28.1818181818182, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19920382, Length=200, Percent_Identity=28, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650670, Length=206, Percent_Identity=26.6990291262136, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29938; Mature: 29807
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVRGRRARAPFFVDRMKPATETAQMDIQIENAGGVLTITLARPAKKNAITAAMYQTMA CCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH DALAAAQDDKSVRAILIRGSDGNFSAGNDLDDFMKAPPKDEHAPVFQFLRQIAGAHKPIV HHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHH AAVAGVAVGIGVTMLLHCDLVYAADTAQLSLPFAQLGLCPEAASSLLLPRVAGHQVAAEK HHHHHHHHHHHHHHHHHHHHHEECCCCCEECCHHHHCCCHHHHHHHHHHHHHCHHHHHHH LLLGEPFDALEAHRIGLVNRVLPAADLDAFAAQQAAKLVALPASSLRATKAFLKKGSAAD HHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH IAARMSEEGDQFGKMLRSPEVREAITAFFEKRKPDFWQFD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTVRGRRARAPFFVDRMKPATETAQMDIQIENAGGVLTITLARPAKKNAITAAMYQTMA CCCCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH DALAAAQDDKSVRAILIRGSDGNFSAGNDLDDFMKAPPKDEHAPVFQFLRQIAGAHKPIV HHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHH AAVAGVAVGIGVTMLLHCDLVYAADTAQLSLPFAQLGLCPEAASSLLLPRVAGHQVAAEK HHHHHHHHHHHHHHHHHHHHHEECCCCCEECCHHHHCCCHHHHHHHHHHHHHCHHHHHHH LLLGEPFDALEAHRIGLVNRVLPAADLDAFAAQQAAKLVALPASSLRATKAFLKKGSAAD HHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH IAARMSEEGDQFGKMLRSPEVREAITAFFEKRKPDFWQFD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA