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The map label for this gene is ydaU [C]

Identifier: 126453424

GI number: 126453424

Start: 1400820

End: 1401590

Strand: Reverse

Name: ydaU [C]

Synonym: BURPS1106A_1435

Alternate gene names: 126453424

Gene position: 1401590-1400820 (Counterclockwise)

Preceding gene: 126452301

Following gene: 126453412

Centisome position: 35.14

GC content: 60.96

Gene sequence:

>771_bases
ATGAACTTCTGGAATCGGCACATCGGTGACCTCATCCGCGATACCGTGAGCCTGTCGATGCTCGAGGACGGCGCCTACAA
CCGGCTGCTCGATCAGTACTACCAGACCGAGCGGCCGCTTCCTCTCGACAAGAAGCTGATCTATCGGCTCGCGCGCGCGA
CGAGCGCCGCTGAGCGCCGGGCCGTCGACTTCGTGCTCGAAACGTTCTTCCACGCGCGTGACGACGGGTATCACCAGAAG
CGGTGCGATATCGAGATTGCCGCGTATCAGCAGAAGCAACGCAAGGCCCAAGCATCTGCCAATGCACGATGGAACAAGTC
CGAAGGCGATGCGAACGCACATGCGAACGCATCCGCAACGCATGATGCTCCGGATATGCGAACGCATTGCGAAGGCAATG
CTAGCCATAAGCCAGAAGCCAATATCCAGATAAGGCCTTCCGTTCCTGACGGAACGGACGCTGATGCGTCGCCACCCGGG
ATGTCGGCGAAGGAGGCGATCTTCCATGTCGCAGTGCCGTGGTTGACGACTCGCGGCGTTGCGGACAAGAGCGCGCGCTC
GTTGCTCGGCGGTGCCATCAAGCAACTGGGGGAGGAAGGTGCGTGGATGCTCGCGCAAGACTGCATCCGCGAAGGCCCGC
TTGAGCCGGCGGCCTGGATTGCAAGCTCAATCAACGCTCGAATGCCGGGCGCCAAGGGCAGGCGGAGCCGTCATAACGGC
TTGGACCAAATCGACTACCGCGAAGGGATTGCGCATGACGGAAGCTTTTGA

Upstream 100 bases:

>100_bases
CCATGGACCGCTTGGAGGAATTGATCTCGGTGCTCATGGAGGCACGCGACCAGGCTACGGCGGAGGAGCGCCGGCTGCCA
TGCGACGCGGAAGGTGACGC

Downstream 100 bases:

>100_bases
AACCAAGATCGCGACGCGTGCTTCGGAGTGCGAGACGCACGGCGGTTACGACGAAAGGGGAACGGTCATGCCGTTCGGTC
CTCGTCGGACGCACTGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNFWNRHIGDLIRDTVSLSMLEDGAYNRLLDQYYQTERPLPLDKKLIYRLARATSAAERRAVDFVLETFFHARDDGYHQK
RCDIEIAAYQQKQRKAQASANARWNKSEGDANAHANASATHDAPDMRTHCEGNASHKPEANIQIRPSVPDGTDADASPPG
MSAKEAIFHVAVPWLTTRGVADKSARSLLGGAIKQLGEEGAWMLAQDCIREGPLEPAAWIASSINARMPGAKGRRSRHNG
LDQIDYREGIAHDGSF

Sequences:

>Translated_256_residues
MNFWNRHIGDLIRDTVSLSMLEDGAYNRLLDQYYQTERPLPLDKKLIYRLARATSAAERRAVDFVLETFFHARDDGYHQK
RCDIEIAAYQQKQRKAQASANARWNKSEGDANAHANASATHDAPDMRTHCEGNASHKPEANIQIRPSVPDGTDADASPPG
MSAKEAIFHVAVPWLTTRGVADKSARSLLGGAIKQLGEEGAWMLAQDCIREGPLEPAAWIASSINARMPGAKGRRSRHNG
LDQIDYREGIAHDGSF
>Mature_256_residues
MNFWNRHIGDLIRDTVSLSMLEDGAYNRLLDQYYQTERPLPLDKKLIYRLARATSAAERRAVDFVLETFFHARDDGYHQK
RCDIEIAAYQQKQRKAQASANARWNKSEGDANAHANASATHDAPDMRTHCEGNASHKPEANIQIRPSVPDGTDADASPPG
MSAKEAIFHVAVPWLTTRGVADKSARSLLGGAIKQLGEEGAWMLAQDCIREGPLEPAAWIASSINARMPGAKGRRSRHNG
LDQIDYREGIAHDGSF

Specific function: Unknown

COG id: COG3756

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28390; Mature: 28390

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFWNRHIGDLIRDTVSLSMLEDGAYNRLLDQYYQTERPLPLDKKLIYRLARATSAAERR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AVDFVLETFFHARDDGYHQKRCDIEIAAYQQKQRKAQASANARWNKSEGDANAHANASAT
HHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
HDAPDMRTHCEGNASHKPEANIQIRPSVPDGTDADASPPGMSAKEAIFHVAVPWLTTRGV
CCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
ADKSARSLLGGAIKQLGEEGAWMLAQDCIREGPLEPAAWIASSINARMPGAKGRRSRHNG
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCC
LDQIDYREGIAHDGSF
CCHHHHHHCCCCCCCC
>Mature Secondary Structure
MNFWNRHIGDLIRDTVSLSMLEDGAYNRLLDQYYQTERPLPLDKKLIYRLARATSAAERR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AVDFVLETFFHARDDGYHQKRCDIEIAAYQQKQRKAQASANARWNKSEGDANAHANASAT
HHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
HDAPDMRTHCEGNASHKPEANIQIRPSVPDGTDADASPPGMSAKEAIFHVAVPWLTTRGV
CCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
ADKSARSLLGGAIKQLGEEGAWMLAQDCIREGPLEPAAWIASSINARMPGAKGRRSRHNG
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCC
LDQIDYREGIAHDGSF
CCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA