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The map label for this gene is dnaC [H]

Identifier: 126453412

GI number: 126453412

Start: 1400057

End: 1400836

Strand: Reverse

Name: dnaC [H]

Synonym: BURPS1106A_1434

Alternate gene names: 126453412

Gene position: 1400836-1400057 (Counterclockwise)

Preceding gene: 126453424

Following gene: 126454472

Centisome position: 35.12

GC content: 60.64

Gene sequence:

>780_bases
ATGACGGAAGCTTTTGAAACCAAGATCGCGACGCGTGCTTCGGAGTGCGAGACGCACGGCGGTTACGACGAAAGGGGAAC
GGTCATGCCGTTCGGTCCTCGTCGGACGCACTGGCATGGGTGCCCGCAGTGTGCCGAAATTCGCCACGCTGAAACGGAGG
CTCGCAAGTTCGAGGAACTGAATCGCCTGCAACAGCGCCTTCGCGAGCGTCGACTGAGTGCGTCCGGGATTCCGCTGCGG
TTTCGCGATCGCACGTTCGACAATTTCGTCGCCGACACCGATGCGAAGCGCGGCGCGCTGACGATTGCCACCGACTTCAC
TGTCAACTTTGCCGCGCATTGCGAGCGCGGAACGACGGTCGTCTTTTCTGGCCCACCGGGAACTGGAAAGACCCATTTGG
CGATCGCGGCTGCGATGGTCGTTATGCAGTCGGGAACGGCTTTGTACACGAACGCGCTGGATCTGGTCCGGATGATCCGG
GACACGTGGCGGCGAGATTCTGAGGCGACGGAAAGCGCGGTATTGCAAGACCTGTCTTCCGTCGATTTGCTGGTGATCGA
CGAGATTGGCGTGCAGTACGGCACCGAAGGTGAACAGGTGATCCTGTTCGACATCTTGAACCGCCGATACCGCGACCTGA
TGCCGACGATCCTGCTCACGAATCTCGGCGTCAAAGGGATGAAGGAGTTCCTGGGCGATCGCAGCTTTGACCGCCTGCGT
GAAGGCGGCATATGGGTCGCGTTCGACTGGGAGTCGTACCGCGGACGGAGGCCGGAATGA

Upstream 100 bases:

>100_bases
TGGATTGCAAGCTCAATCAACGCTCGAATGCCGGGCGCCAAGGGCAGGCGGAGCCGTCATAACGGCTTGGACCAAATCGA
CTACCGCGAAGGGATTGCGC

Downstream 100 bases:

>100_bases
ACATCATCAGGTTAAACGGTGGTCAGCGCGTTGTGCTCAGCGGAACGGAGATCGACGGGCGTGTCTTTGTCCAGCTCGAC
GTCGTGAATACGCTGCCGGA

Product: DNA replication protein DnaC, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTEAFETKIATRASECETHGGYDERGTVMPFGPRRTHWHGCPQCAEIRHAETEARKFEELNRLQQRLRERRLSASGIPLR
FRDRTFDNFVADTDAKRGALTIATDFTVNFAAHCERGTTVVFSGPPGTGKTHLAIAAAMVVMQSGTALYTNALDLVRMIR
DTWRRDSEATESAVLQDLSSVDLLVIDEIGVQYGTEGEQVILFDILNRRYRDLMPTILLTNLGVKGMKEFLGDRSFDRLR
EGGIWVAFDWESYRGRRPE

Sequences:

>Translated_259_residues
MTEAFETKIATRASECETHGGYDERGTVMPFGPRRTHWHGCPQCAEIRHAETEARKFEELNRLQQRLRERRLSASGIPLR
FRDRTFDNFVADTDAKRGALTIATDFTVNFAAHCERGTTVVFSGPPGTGKTHLAIAAAMVVMQSGTALYTNALDLVRMIR
DTWRRDSEATESAVLQDLSSVDLLVIDEIGVQYGTEGEQVILFDILNRRYRDLMPTILLTNLGVKGMKEFLGDRSFDRLR
EGGIWVAFDWESYRGRRPE
>Mature_258_residues
TEAFETKIATRASECETHGGYDERGTVMPFGPRRTHWHGCPQCAEIRHAETEARKFEELNRLQQRLRERRLSASGIPLRF
RDRTFDNFVADTDAKRGALTIATDFTVNFAAHCERGTTVVFSGPPGTGKTHLAIAAAMVVMQSGTALYTNALDLVRMIRD
TWRRDSEATESAVLQDLSSVDLLVIDEIGVQYGTEGEQVILFDILNRRYRDLMPTILLTNLGVKGMKEFLGDRSFDRLRE
GGIWVAFDWESYRGRRPE

Specific function: This protein is required for chromosomal replication. It forms, in concert with dnaB protein and other prepriming proteins dnaT, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaC family [H]

Homologues:

Organism=Escherichia coli, GI1790823, Length=190, Percent_Identity=37.8947368421053, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787623, Length=203, Percent_Identity=37.4384236453202, Blast_Score=127, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 29351; Mature: 29219

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAFETKIATRASECETHGGYDERGTVMPFGPRRTHWHGCPQCAEIRHAETEARKFEEL
CCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NRLQQRLRERRLSASGIPLRFRDRTFDNFVADTDAKRGALTIATDFTVNFAAHCERGTTV
HHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEECCEEEHHEECCCCCEE
VFSGPPGTGKTHLAIAAAMVVMQSGTALYTNALDLVRMIRDTWRRDSEATESAVLQDLSS
EEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
VDLLVIDEIGVQYGTEGEQVILFDILNRRYRDLMPTILLTNLGVKGMKEFLGDRSFDRLR
CCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
EGGIWVAFDWESYRGRRPE
HCCEEEEEECHHCCCCCCC
>Mature Secondary Structure 
TEAFETKIATRASECETHGGYDERGTVMPFGPRRTHWHGCPQCAEIRHAETEARKFEEL
CCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NRLQQRLRERRLSASGIPLRFRDRTFDNFVADTDAKRGALTIATDFTVNFAAHCERGTTV
HHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEECCEEEHHEECCCCCEE
VFSGPPGTGKTHLAIAAAMVVMQSGTALYTNALDLVRMIRDTWRRDSEATESAVLQDLSS
EEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
VDLLVIDEIGVQYGTEGEQVILFDILNRRYRDLMPTILLTNLGVKGMKEFLGDRSFDRLR
CCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
EGGIWVAFDWESYRGRRPE
HCCEEEEEECHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]