| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453344
Identifier: 126453344
GI number: 126453344
Start: 2528709
End: 2529506
Strand: Reverse
Name: 126453344
Synonym: BURPS1106A_2574
Alternate gene names: NA
Gene position: 2529506-2528709 (Counterclockwise)
Preceding gene: 126453674
Following gene: 126451902
Centisome position: 63.42
GC content: 68.17
Gene sequence:
>798_bases ATGACGAACCACGACCATCGCATCGCATTCGTGCATATCCCGAGAACCGCCGGCACGACCTTCGGCGCGTATCTCGACGG GCTGTACGCGGGCCGCGACGTCGCGAAGTTCTATGCGGACGACGCGCACCCCGTCGTCAACGAGAAGCTCGACGCGTTCC GGCGGCTCGAGGCTGGCGAGAAAGCGTCGTACGCGCTGCTGCGCGGCCATTTCGTGTACGGCTTCGACGGCGGCGAGAGC GGCTGCCGCTACGTCACGCTGCTGCGCGAGCCCGTCGCGCGCCTCGTGTCGTACTACTTCTACGCGCTCAAAGAGCCGAT GAACTATCTGCACACGTATCTGCTGCAGCGGCGCATCGGGCTCGAATCATTCCTCATGAGCGACGCGAGCATCGACCTCG ACAACTATCAGGTGCGCGCGGTGTCCGGCGCGGCGTTCGGCTCGTCGCGCGAGCGCGTGAGCGGCGCGCATCTGGCGCTC GCGAAGCGCAACCTCGTCGAGCGGTTCGCGGCGTTCGGGCTCACGGAGCGGTTCGATGCGTCGATGCGGCGCTTCGCGCG GCAATTCGGCTGGGCGCCCGCGCCGCGGGAGCGGCGCAACGAGGGCGCGTACGGGCGCGACGTCGAGCTTGGCGACGCAT GCCGCGCGTACGTCGAGGAAAAGAATCGGTTCGACATCGAGCTGTACCGCTTCGCGCAGGCGCACTTCGAGTCCGCCGCC GCGAGCGGCGACGACGGGCGGGCGGATCGTTCGGCCGATCGCCCGGCCGACCACGCGGTTCATACGACAAGGAGCTGA
Upstream 100 bases:
>100_bases TCGCGGGCATCGGCCATTACCTGCTGCGCGATTGCCCGCACGCGCTCGCGCGCACGCTCGGCCAAGCGTGGGAAGCCGTG TCCCGCCGGAGCGTCGAGGC
Downstream 100 bases:
>100_bases CGAGATGCAAACACTGGAGATTCGGCCGCTGAGCGGGACCATCGGCGCGCAGGTGCGCAACCGCACGCTCGCCGACGTCG TCGAGAGCGGGCGCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLEAGEKASYALLRGHFVYGFDGGES GCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIGLESFLMSDASIDLDNYQVRAVSGAAFGSSRERVSGAHLAL AKRNLVERFAAFGLTERFDASMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFESAA ASGDDGRADRSADRPADHAVHTTRS
Sequences:
>Translated_265_residues MTNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLEAGEKASYALLRGHFVYGFDGGES GCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIGLESFLMSDASIDLDNYQVRAVSGAAFGSSRERVSGAHLAL AKRNLVERFAAFGLTERFDASMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFESAA ASGDDGRADRSADRPADHAVHTTRS >Mature_264_residues TNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLEAGEKASYALLRGHFVYGFDGGESG CRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIGLESFLMSDASIDLDNYQVRAVSGAAFGSSRERVSGAHLALA KRNLVERFAAFGLTERFDASMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFESAAA SGDDGRADRSADRPADHAVHTTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29898; Mature: 29766
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLEAGE CCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC KASYALLRGHFVYGFDGGESGCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIG HHHHHEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LESFLMSDASIDLDNYQVRAVSGAAFGSSRERVSGAHLALAKRNLVERFAAFGLTERFDA HHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFESAA HHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ASGDDGRADRSADRPADHAVHTTRS CCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure TNHDHRIAFVHIPRTAGTTFGAYLDGLYAGRDVAKFYADDAHPVVNEKLDAFRRLEAGE CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC KASYALLRGHFVYGFDGGESGCRYVTLLREPVARLVSYYFYALKEPMNYLHTYLLQRRIG HHHHHEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LESFLMSDASIDLDNYQVRAVSGAAFGSSRERVSGAHLALAKRNLVERFAAFGLTERFDA HHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SMRRFARQFGWAPAPRERRNEGAYGRDVELGDACRAYVEEKNRFDIELYRFAQAHFESAA HHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ASGDDGRADRSADRPADHAVHTTRS CCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA