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The map label for this gene is yngJ [H]

Identifier: 126453278

GI number: 126453278

Start: 435642

End: 436850

Strand: Direct

Name: yngJ [H]

Synonym: BURPS1106A_0471

Alternate gene names: 126453278

Gene position: 435642-436850 (Clockwise)

Preceding gene: 126452416

Following gene: 126454195

Centisome position: 10.92

GC content: 67.41

Gene sequence:

>1209_bases
ATGGACCTGAATTTCACCGCAGAAGAGGAAGCGTTCCGCGCGCAAGTGCAGCGCTTTCTCGCCGACGAGCTGCCGCCGCG
CATATCGCGCAAGGTGAAGGGCGGCTTGCGGCTCACGCGCGACGACATGCGCGAATGGCACGCCATCCTCAACGCGCGGG
GCTGGCTCGCGAGCCACTGGCCGCGCGAATGGGGCGGCCCAGGCTGGAGCGTCGCGCAGAAGTTCCTGTTCGACAACGAA
TGCGCGATCGCGGGCGCGCCGCGCATCGTGCCGTTCGGCGTGAACATGCTCGGCCCCGTGCTCATCAAGTACGGCAGCGC
AGCGCAGAAGCGCCACTGGCTGCCGCGCATTCTCGACGGCACCGACTGGTGGTGCCAGGGCTATTCGGAGCCGGGCGCGG
GCTCGGATCTCGCGGCGGTGAGCACGAGCGCGGTGCGCGGCGTGGATGCGCGGGGCGATCATTACATCGTCAACGGCCAG
AAGACTTGGACGACGCTCGGCCATTACGCGAACATGATCTTCTGCCTCGTGCGCACCGCGACCGACGTGCGCAAGCAGGA
AGGCATCAGCTTCCTGCTCGTCGACATGAATTCGCCCGGCGTGGAGGTGCGCCCGATCGTCACGCTCGACGGCGAGCACG
AAGTGAACGAAGTGTTCTTCACCGACGTGCGCGTGCCCGCCGAGAACCGGGTCGGCGAAGAGAACCAGGGCTGGACCTAC
GCGAAATACCTGCTCACGTACGAGCGCACCAACATCGCGGGCGTGGGCTTCTCGGTCGCGGCGCTGGACAAGTTGCGCGC
GGTGGCGGCGAAAGTGACGAAGAACGGCCGCCCGCTCGCCGACGATCCGCTCTTCGCCGCGCGGCTCGCGCGCGTCGCGA
TCGAGCTCGACAACATGAAGACGACGAACCTGCGCGTGCTCGCGGCCGTGGCGGGCGGCGGCGCGCCGGGCGCGGAAAGC
TCGATGCTGAAGATTCGCGGCACGCAGATCCGCCAGGAGATCTCGTCGCTGATGCGGCGCGCGATGGGGCCGTACGCGCA
GCCGTTCGTCGACGCGGCGCTCGACGCCGACGACGGCGAGCCGCCGGGCGGCCTGCCCGAAGCGGCGAGCGCCGCGGCGC
AGTATTTCAACAACCGCAAGCTGTCGATCTTCGGCGGCTCGAACGAGATTCAAAAGAACATCATCTCGAAGATGATGCTG
GGGTTGTAA

Upstream 100 bases:

>100_bases
CGTCGCGCGCGGCGAGACCTTCGCGAGCCTGAACCGCATCGACTGACGCCGCGCCGCGTCGCGCGCCGGTCGTCCTTCAA
GTATTCGAGAACGACGTCAC

Downstream 100 bases:

>100_bases
GGACGATCCATGGACTTTCGACACACCGAAGACCGCCGAATGCTGGTGGACAGCCTGAACCGCTTCATCGCCGAACAGTA
CGCGTTCCCCGTGCGCGACC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHWPREWGGPGWSVAQKFLFDNE
CAIAGAPRIVPFGVNMLGPVLIKYGSAAQKRHWLPRILDGTDWWCQGYSEPGAGSDLAAVSTSAVRGVDARGDHYIVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLVDMNSPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENRVGEENQGWTY
AKYLLTYERTNIAGVGFSVAALDKLRAVAAKVTKNGRPLADDPLFAARLARVAIELDNMKTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEISSLMRRAMGPYAQPFVDAALDADDGEPPGGLPEAASAAAQYFNNRKLSIFGGSNEIQKNIISKMML
GL

Sequences:

>Translated_402_residues
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHWPREWGGPGWSVAQKFLFDNE
CAIAGAPRIVPFGVNMLGPVLIKYGSAAQKRHWLPRILDGTDWWCQGYSEPGAGSDLAAVSTSAVRGVDARGDHYIVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLVDMNSPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENRVGEENQGWTY
AKYLLTYERTNIAGVGFSVAALDKLRAVAAKVTKNGRPLADDPLFAARLARVAIELDNMKTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEISSLMRRAMGPYAQPFVDAALDADDGEPPGGLPEAASAAAQYFNNRKLSIFGGSNEIQKNIISKMML
GL
>Mature_402_residues
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHWPREWGGPGWSVAQKFLFDNE
CAIAGAPRIVPFGVNMLGPVLIKYGSAAQKRHWLPRILDGTDWWCQGYSEPGAGSDLAAVSTSAVRGVDARGDHYIVNGQ
KTWTTLGHYANMIFCLVRTATDVRKQEGISFLLVDMNSPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENRVGEENQGWTY
AKYLLTYERTNIAGVGFSVAALDKLRAVAAKVTKNGRPLADDPLFAARLARVAIELDNMKTTNLRVLAAVAGGGAPGAES
SMLKIRGTQIRQEISSLMRRAMGPYAQPFVDAALDADDGEPPGGLPEAASAAAQYFNNRKLSIFGGSNEIQKNIISKMML
GL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=312, Percent_Identity=27.5641025641026, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI4557231, Length=312, Percent_Identity=27.5641025641026, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI226958412, Length=266, Percent_Identity=28.1954887218045, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557233, Length=406, Percent_Identity=28.3251231527094, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4501859, Length=408, Percent_Identity=25.4901960784314, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI48976061, Length=341, Percent_Identity=26.3929618768328, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI211971008, Length=341, Percent_Identity=26.3929618768328, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI226958414, Length=233, Percent_Identity=29.6137339055794, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4501857, Length=412, Percent_Identity=23.5436893203883, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI76496475, Length=208, Percent_Identity=30.2884615384615, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI4557235, Length=208, Percent_Identity=30.2884615384615, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI7656849, Length=206, Percent_Identity=29.6116504854369, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21361497, Length=255, Percent_Identity=25.0980392156863, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI38505218, Length=314, Percent_Identity=26.7515923566879, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=27.3311897106109, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1786223, Length=329, Percent_Identity=23.1003039513678, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=414, Percent_Identity=26.5700483091787, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=332, Percent_Identity=26.2048192771084, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=313, Percent_Identity=26.517571884984, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=416, Percent_Identity=24.5192307692308, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=307, Percent_Identity=26.7100977198697, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=407, Percent_Identity=23.0958230958231, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=239, Percent_Identity=28.8702928870293, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=214, Percent_Identity=29.4392523364486, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=252, Percent_Identity=26.5873015873016, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71985192, Length=203, Percent_Identity=30.0492610837438, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=305, Percent_Identity=25.5737704918033, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355753, Length=267, Percent_Identity=28.0898876404494, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21356377, Length=260, Percent_Identity=30, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24660351, Length=316, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281363737, Length=209, Percent_Identity=28.2296650717703, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24666513, Length=291, Percent_Identity=25.085910652921, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24646207, Length=360, Percent_Identity=25.2777777777778, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44072; Mature: 44072

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREWGGPGWSVAQKFLFDNECAIAGAPRIVPFGVNMLGPVLIKYGSAAQKRHWLPRILDG
CHHHCCCCHHHHHHHHCCCCCEECCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCHHCCC
TDWWCQGYSEPGAGSDLAAVSTSAVRGVDARGDHYIVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLVDMNSPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENRVGEENQGWTY
HHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCHHHCCCCCCCCCEE
AKYLLTYERTNIAGVGFSVAALDKLRAVAAKVTKNGRPLADDPLFAARLARVAIELDNMK
EHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCC
TTNLRVLAAVAGGGAPGAESSMLKIRGTQIRQEISSLMRRAMGPYAQPFVDAALDADDGE
CCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
PPGGLPEAASAAAQYFNNRKLSIFGGSNEIQKNIISKMMLGL
CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNFTAEEEAFRAQVQRFLADELPPRISRKVKGGLRLTRDDMREWHAILNARGWLASHW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHHHHHHHHHCCCCHHHCC
PREWGGPGWSVAQKFLFDNECAIAGAPRIVPFGVNMLGPVLIKYGSAAQKRHWLPRILDG
CHHHCCCCHHHHHHHHCCCCCEECCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCHHCCC
TDWWCQGYSEPGAGSDLAAVSTSAVRGVDARGDHYIVNGQKTWTTLGHYANMIFCLVRTA
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TDVRKQEGISFLLVDMNSPGVEVRPIVTLDGEHEVNEVFFTDVRVPAENRVGEENQGWTY
HHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCHHHCCCCCCCCCEE
AKYLLTYERTNIAGVGFSVAALDKLRAVAAKVTKNGRPLADDPLFAARLARVAIELDNMK
EHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCC
TTNLRVLAAVAGGGAPGAESSMLKIRGTQIRQEISSLMRRAMGPYAQPFVDAALDADDGE
CCCEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
PPGGLPEAASAAAQYFNNRKLSIFGGSNEIQKNIISKMMLGL
CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]