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The map label for this gene is yngJ [H]

Identifier: 126454195

GI number: 126454195

Start: 436860

End: 437990

Strand: Direct

Name: yngJ [H]

Synonym: BURPS1106A_0472

Alternate gene names: 126454195

Gene position: 436860-437990 (Clockwise)

Preceding gene: 126453278

Following gene: 126453757

Centisome position: 10.95

GC content: 72.5

Gene sequence:

>1131_bases
ATGGACTTTCGACACACCGAAGACCGCCGAATGCTGGTGGACAGCCTGAACCGCTTCATCGCCGAACAGTACGCGTTCCC
CGTGCGCGACCGGATCGCGCTGTCGCCGGCCGGCTACAGCGACGACATGTGGCGGCGCTTCGCCGAGCTCGGCGCGATCG
GCGCGCTCTTTCCCCAGGAATGCGGCGGCTTCGGCGGCGCAGGCTTCGACATCGCGCTCGTGTTCGAGTGCCTCGGCCGC
GGGCTCGTCGTCGAGCCGTTCGTCGGCGCGCTGATGGCCGGGCGCGCGCTCGCCCAAGCGGGCGGCCGCGCTCACCTCGA
ACGGCTCGCGGCGCTGATCGAAGGGCGCGCGATCGGCGCGTTCGCGCACGCGGAACCCGATACGCACTACGAGCCGCACA
CGGTGAGAACGCGCGCGGCTCGCGACGGCGAGGGCTGGGTGCTCGACGGCGCGAAAGCCGTCGTCGATTGCGGCGAGCAC
GCGACGTTCTTCGTCGTCAGCGCGCGCATCGCCGGCGGCGAAGACGACGCGGCCGGCCTGTCGCTCTTCGTCGTGCCGAG
GACGGCGCCCGGCGTGACGGTGCGCGGCTACCGCAAGATCGACGGCGGCCGCGCGGCCGACGTGCGGCTCGAGCGGGTCG
CGCTGGCCGACGACGCGTGCGTCGGCACGCCCGGCGAAGCGGCCGACGCGATCGAGCGCGCGATCGGCTTCGGCCTGCTC
GCGCTCGCGGCGGAGGCGCTCGGCGCGATGGACGTCGCGAAGGCGCACACGCTCGAGTATCTGCGCACGCGCCGCCAGTT
CGGCGTGCCGATCGGCAGCTTCCAGGCGCTGCAGCACCGGATGGCGGAGCTGCTGCTCGAGATCGAGCAGGCGCGCTCGG
CGGTGATCAACGCGGCCGCGCAGCTCGACGCGCCGCGCGTGGCGCGCGAGCGTGCGCTGTCGGCCGCGAAGTACAGCGTC
GGCCGGATCGGCGCGCTCGTCGCCGAGGAGAGCATCCAGTTACACGGCGGGATCGGGATGACATGGGAACTGCCGCTCGC
GCACTACGCGAAGCGGCTCGTGATGATCGACCACCAGCTCGGCGACGAGGATCACCACCTCGCGCGCTACGCCGCGCTGT
CGAGGCAATAG

Upstream 100 bases:

>100_bases
GCAGTATTTCAACAACCGCAAGCTGTCGATCTTCGGCGGCTCGAACGAGATTCAAAAGAACATCATCTCGAAGATGATGC
TGGGGTTGTAAGGACGATCC

Downstream 100 bases:

>100_bases
CCGCCAACGAACGGAGGAGACGAAGATGCGCAACGAACCGGGCGCGCGGCCGCTCGCGGGGATCAAGGTCCTCGACTTCT
CGCGCGTGCTCGCCGGGCCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDFRHTEDRRMLVDSLNRFIAEQYAFPVRDRIALSPAGYSDDMWRRFAELGAIGALFPQECGGFGGAGFDIALVFECLGR
GLVVEPFVGALMAGRALAQAGGRAHLERLAALIEGRAIGAFAHAEPDTHYEPHTVRTRAARDGEGWVLDGAKAVVDCGEH
ATFFVVSARIAGGEDDAAGLSLFVVPRTAPGVTVRGYRKIDGGRAADVRLERVALADDACVGTPGEAADAIERAIGFGLL
ALAAEALGAMDVAKAHTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAAQLDAPRVARERALSAAKYSV
GRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYAALSRQ

Sequences:

>Translated_376_residues
MDFRHTEDRRMLVDSLNRFIAEQYAFPVRDRIALSPAGYSDDMWRRFAELGAIGALFPQECGGFGGAGFDIALVFECLGR
GLVVEPFVGALMAGRALAQAGGRAHLERLAALIEGRAIGAFAHAEPDTHYEPHTVRTRAARDGEGWVLDGAKAVVDCGEH
ATFFVVSARIAGGEDDAAGLSLFVVPRTAPGVTVRGYRKIDGGRAADVRLERVALADDACVGTPGEAADAIERAIGFGLL
ALAAEALGAMDVAKAHTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAAQLDAPRVARERALSAAKYSV
GRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYAALSRQ
>Mature_376_residues
MDFRHTEDRRMLVDSLNRFIAEQYAFPVRDRIALSPAGYSDDMWRRFAELGAIGALFPQECGGFGGAGFDIALVFECLGR
GLVVEPFVGALMAGRALAQAGGRAHLERLAALIEGRAIGAFAHAEPDTHYEPHTVRTRAARDGEGWVLDGAKAVVDCGEH
ATFFVVSARIAGGEDDAAGLSLFVVPRTAPGVTVRGYRKIDGGRAADVRLERVALADDACVGTPGEAADAIERAIGFGLL
ALAAEALGAMDVAKAHTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAAQLDAPRVARERALSAAKYSV
GRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLARYAALSRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=320, Percent_Identity=27.5, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI4557233, Length=356, Percent_Identity=27.5280898876405, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI226958412, Length=356, Percent_Identity=25, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI226958414, Length=336, Percent_Identity=25.8928571428571, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI4501859, Length=350, Percent_Identity=25.1428571428571, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI7656849, Length=316, Percent_Identity=24.6835443037975, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4557231, Length=368, Percent_Identity=26.3586956521739, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI187960098, Length=368, Percent_Identity=26.3586956521739, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI76496475, Length=357, Percent_Identity=24.9299719887955, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4557235, Length=357, Percent_Identity=24.9299719887955, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI21361497, Length=353, Percent_Identity=22.9461756373938, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4503943, Length=385, Percent_Identity=24.9350649350649, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=346, Percent_Identity=23.6994219653179, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1786223, Length=349, Percent_Identity=22.0630372492837, Blast_Score=75, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17508101, Length=312, Percent_Identity=29.1666666666667, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=369, Percent_Identity=28.7262872628726, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=308, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=379, Percent_Identity=25.8575197889182, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=380, Percent_Identity=26.5789473684211, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=27.6923076923077, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=26.775956284153, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=313, Percent_Identity=26.1980830670927, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=312, Percent_Identity=24.3589743589744, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=340, Percent_Identity=24.1176470588235, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=243, Percent_Identity=24.6913580246914, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=24.0875912408759, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24666513, Length=353, Percent_Identity=25.2124645892351, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI21355753, Length=353, Percent_Identity=24.929178470255, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21356377, Length=314, Percent_Identity=25.1592356687898, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24660351, Length=361, Percent_Identity=25.207756232687, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24646207, Length=357, Percent_Identity=24.6498599439776, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281363737, Length=349, Percent_Identity=24.6418338108883, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40398; Mature: 40398

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRHTEDRRMLVDSLNRFIAEQYAFPVRDRIALSPAGYSDDMWRRFAELGAIGALFPQE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCCCHHHHHHHHHHHHHHCCCHHH
CGGFGGAGFDIALVFECLGRGLVVEPFVGALMAGRALAQAGGRAHLERLAALIEGRAIGA
CCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE
FAHAEPDTHYEPHTVRTRAARDGEGWVLDGAKAVVDCGEHATFFVVSARIAGGEDDAAGL
EECCCCCCCCCCCHHHHHCCCCCCCEEECCCHHHHHCCCCCEEEEEEEEECCCCCCCCCE
SLFVVPRTAPGVTVRGYRKIDGGRAADVRLERVALADDACVGTPGEAADAIERAIGFGLL
EEEEEECCCCCCEEECEEECCCCCCHHEEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHH
ALAAEALGAMDVAKAHTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDAPRVARERALSAAKYSVGRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHHEEHHC
GDEDHHLARYAALSRQ
CCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDFRHTEDRRMLVDSLNRFIAEQYAFPVRDRIALSPAGYSDDMWRRFAELGAIGALFPQE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCCCHHHHHHHHHHHHHHCCCHHH
CGGFGGAGFDIALVFECLGRGLVVEPFVGALMAGRALAQAGGRAHLERLAALIEGRAIGA
CCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE
FAHAEPDTHYEPHTVRTRAARDGEGWVLDGAKAVVDCGEHATFFVVSARIAGGEDDAAGL
EECCCCCCCCCCCHHHHHCCCCCCCEEECCCHHHHHCCCCCEEEEEEEEECCCCCCCCCE
SLFVVPRTAPGVTVRGYRKIDGGRAADVRLERVALADDACVGTPGEAADAIERAIGFGLL
EEEEEECCCCCCEEECEEECCCCCCHHEEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHH
ALAAEALGAMDVAKAHTLEYLRTRRQFGVPIGSFQALQHRMAELLLEIEQARSAVINAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDAPRVARERALSAAKYSVGRIGALVAEESIQLHGGIGMTWELPLAHYAKRLVMIDHQL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHHHHHEEHHC
GDEDHHLARYAALSRQ
CCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]