| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453243
Identifier: 126453243
GI number: 126453243
Start: 3082540
End: 3083055
Strand: Reverse
Name: 126453243
Synonym: BURPS1106A_3166
Alternate gene names: NA
Gene position: 3083055-3082540 (Counterclockwise)
Preceding gene: 126452321
Following gene: 126454360
Centisome position: 77.3
GC content: 64.15
Gene sequence:
>516_bases ATGCGTAACCGTAAATTTGTTCCGTTCGTTGTCGCGTTGGCATTCGCAGCGGCCGCAGCTACGCCCGCGCTCGCCGTCAC CGTGGTTCGCGTCGACGGGCAGCCGATGAACCCGAACGGCGAGCCGTTCTCGGCGACCTCGGCTCCTTTGGAAACGACGC TGTCCAAGGGCTCGATCAGCGCGAACTGTGTCGCGACGTTCAACGGCACGATCACGCCCGCGGGCATCGTCAACATCACG TCGACGACGTTTACCGGCACCAACAGCCTGTGCGGCCTCATCAAGGGCAGCGCAAGCGGCACGAATCCGTGGACGGGCCA GGCCGACAGCGCAACGCAACTGACGATCAACAACGCGCAGGTCAACGTGACGCTGCTCGGCCAGTGCGGCCCGAGCAAGG TCGTGACGTCGTGGACCGATGCGAACTCGTCGCTCACCTTCAGCAACGCGGCTCTGGCGCCGGACTGCAAGGTCACGGGG ACGGTCGTCACGTCGCCGAAGTTCCACGTTCAGTAA
Upstream 100 bases:
>100_bases CGCCGGCGCCCGGGCTTCCTGTGACCGAGCGGGCGGAATTCTCCGGCCGCAACGTCACGCCACTGGCGGCAAGCCGCCAT TCGTCAAGTGAGGCAGACCC
Downstream 100 bases:
>100_bases TTCGTCACGGTTTCGACGTGGGGCGGCTCGTCGATCATGAGCCGTTCCACGTGCATGGCGCGAACGCGGCTGCCAGGAGC CGCCGCGTTCGCAAGACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRNRKFVPFVVALAFAAAAATPALAVTVVRVDGQPMNPNGEPFSATSAPLETTLSKGSISANCVATFNGTITPAGIVNIT STTFTGTNSLCGLIKGSASGTNPWTGQADSATQLTINNAQVNVTLLGQCGPSKVVTSWTDANSSLTFSNAALAPDCKVTG TVVTSPKFHVQ
Sequences:
>Translated_171_residues MRNRKFVPFVVALAFAAAAATPALAVTVVRVDGQPMNPNGEPFSATSAPLETTLSKGSISANCVATFNGTITPAGIVNIT STTFTGTNSLCGLIKGSASGTNPWTGQADSATQLTINNAQVNVTLLGQCGPSKVVTSWTDANSSLTFSNAALAPDCKVTG TVVTSPKFHVQ >Mature_171_residues MRNRKFVPFVVALAFAAAAATPALAVTVVRVDGQPMNPNGEPFSATSAPLETTLSKGSISANCVATFNGTITPAGIVNIT STTFTGTNSLCGLIKGSASGTNPWTGQADSATQLTINNAQVNVTLLGQCGPSKVVTSWTDANSSLTFSNAALAPDCKVTG TVVTSPKFHVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17391; Mature: 17391
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRKFVPFVVALAFAAAAATPALAVTVVRVDGQPMNPNGEPFSATSAPLETTLSKGSIS CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCC ANCVATFNGTITPAGIVNITSTTFTGTNSLCGLIKGSASGTNPWTGQADSATQLTINNAQ EEEEEEECCEECCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCE VNVTLLGQCGPSKVVTSWTDANSSLTFSNAALAPDCKVTGTVVTSPKFHVQ EEEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEEECCEEECC >Mature Secondary Structure MRNRKFVPFVVALAFAAAAATPALAVTVVRVDGQPMNPNGEPFSATSAPLETTLSKGSIS CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCC ANCVATFNGTITPAGIVNITSTTFTGTNSLCGLIKGSASGTNPWTGQADSATQLTINNAQ EEEEEEECCEECCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCE VNVTLLGQCGPSKVVTSWTDANSSLTFSNAALAPDCKVTGTVVTSPKFHVQ EEEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA