| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454360
Identifier: 126454360
GI number: 126454360
Start: 3081027
End: 3082049
Strand: Reverse
Name: 126454360
Synonym: BURPS1106A_3165
Alternate gene names: NA
Gene position: 3082049-3081027 (Counterclockwise)
Preceding gene: 126453243
Following gene: 126452115
Centisome position: 77.27
GC content: 70.58
Gene sequence:
>1023_bases ATGCCTGACAAACATAATCATCGCGTCGACGCCGAAGGCCTGTCGCTCGGCAGCTTGCGCACGGCAGCATGGCTTCGGTA TCTCCTCGATCATGCGGAGCGTTTCGCCGCCGCGGCGGCGTCAAGCCGCGAAGCGCGCGTTGCGGCCGCCGCGCGCGACA CGCTCGCGAAGGCGGGCGCGCACGCGCGGCGCGAACCGGCCGCCGACGCGGGTCTCCTCCTGAACGAACTGCTCGCGGCG CTGGAAGGCGACGGCGCATCCGTCGACGAGGCGCGCGGCAACGCATATGGCGAACTCGCGCGCACGCCGCCCAAACGGCT GCTTGCCGCCGTCGACCGTTACCTGCCTGGTTCGAAGGCCGTGTTTGACGGCGCGCATGGCGTTGCCGACGTACTTGGCT ATGACGATGCCGAACTCGGCTGGGCCGCGCTCGATTCGATCGAGCTTGGCATCGGGCACGCGCTCGCGAGCGACGGCGAA GCCGCGGACGATGCGATGCGCGGCATCGCCGCCTTCGAAGGGCCGGCGGCGGGGCGGGTGATCGACCGCGCGATCGGGCG CATATGGGGCGCGGACGAAAAGCGCGCCGACGCGTTGAGCGCGCTGGCGGCATTTTCGGCCACGCTTGCGATGAATGCGC CGATCACGCTCGACGCCTACGGCGGCGAGCACAACGGCGTCGCCGCCGCGATTCTTCGCGAGCGCGGGGATCTCGCCTCG GCGCCGGGGTTGCTCGCCGCGCTCGCCGTTTGCAGGCTCGACCGTCTGACGGGCGCGGGCAGCTTCTGGGCGTATTACCT GCTAGCGGGCGTGATGATCGCGGCGCCGCAGGCCGTGGCATCGATCGCCGCGCGGTTTCACCGCGACGCGCTGAGCGCTT GGCTCGACATGCTGCTCGCCGTGCCCGCGCGCAGCCCGATCGGCGACGCCGGCGAGGCCGCATTGGCGCGATTGGCCGCG TCGATGAGCTTCACGTCGCGGCACAATCCGATCGTTCACACGAGGCACAGGTCGATGGGCTGA
Upstream 100 bases:
>100_bases CCTTCGATGCATGGGCGAGGCCGCTCGCGCGCGGCGTGCAGCGACAGTGGCCGTCGCCCGAGTGCGGACACGATCCGCAT CGCTATTTCTCGGATGACCC
Downstream 100 bases:
>100_bases GCGGCGGCCGGCGCAAGCCGCGCTCAGATCGACAGGCAGATCTTGCCGAAGTGCTTGCCGGCCGCTTGATGGGCGAACGC GTCGGCGATGTCGTCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPDKHNHRVDAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAA LEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGE AADDAMRGIAAFEGPAAGRVIDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAA SMSFTSRHNPIVHTRHRSMG
Sequences:
>Translated_340_residues MPDKHNHRVDAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAA LEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGE AADDAMRGIAAFEGPAAGRVIDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAA SMSFTSRHNPIVHTRHRSMG >Mature_339_residues PDKHNHRVDAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGAHARREPAADAGLLLNELLAAL EGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKAVFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGEA ADDAMRGIAAFEGPAAGRVIDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLASA PGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLAVPARSPIGDAGEAALARLAAS MSFTSRHNPIVHTRHRSMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35246; Mature: 35115
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKHNHRVDAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC HARREPAADAGLLLNELLAALEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKA HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCH VFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAGRV HHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH IDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCC APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRSMG HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure PDKHNHRVDAEGLSLGSLRTAAWLRYLLDHAERFAAAAASSREARVAAAARDTLAKAGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC HARREPAADAGLLLNELLAALEGDGASVDEARGNAYGELARTPPKRLLAAVDRYLPGSKA HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCH VFDGAHGVADVLGYDDAELGWAALDSIELGIGHALASDGEAADDAMRGIAAFEGPAAGRV HHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH IDRAIGRIWGADEKRADALSALAAFSATLAMNAPITLDAYGGEHNGVAAAILRERGDLAS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCC APGLLAALAVCRLDRLTGAGSFWAYYLLAGVMIAAPQAVASIAARFHRDALSAWLDMLLA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPARSPIGDAGEAALARLAASMSFTSRHNPIVHTRHRSMG HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA