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The map label for this gene is lpxD

Identifier: 126453222

GI number: 126453222

Start: 2434493

End: 2435578

Strand: Reverse

Name: lpxD

Synonym: BURPS1106A_2482

Alternate gene names: 126453222

Gene position: 2435578-2434493 (Counterclockwise)

Preceding gene: 126453885

Following gene: 126454169

Centisome position: 61.07

GC content: 70.72

Gene sequence:

>1086_bases
ATGGCATTGACGCTTGAGGCGCTCGCCGCGCGGTTCGGCGGCGAGATCGTCGGCGACGGCCGCTGCGAGGTAGGCGCTCT
CGCGCCGCTCGATCAGGCGGGCCCGCGGCAGCTCGCGTTCCTCGCCAATCCGAAGTATCTGGCGCAGGTCGAGACGACGG
GCGCCGGCGCGGTGCTGATCGCGCCGGGCGATCTCGAGAAGCTCGGCGCGGCCGCGCACGGCCGCAATTTCATCGTCACG
CCGAATCCCTACGCCTATTTCGCGCGGGTCGCGCAGATGTTCATCGATCTCGCCGCGCCGCCGCGCGCGGCCGGCGTGCA
TCCGAGCGCGACGATCGATCCGGCCGCGCAGGTCGCCGCGAGCGCGGTGATCGGCCCGCACGTGACGGTCGAGGCGGGCG
CCGTGATCGGCGAGCGCGCGCAGCTCGACGCGAACGTGTTCGTCGGCCGCGGCACGCGGATCGGCGACGATTCGCACCTG
TACCCGAACGTCGCGATCTACCACGGCTGCACGCTCGGGCCGCGCGCGATCGTGCACTCGGGCGCCGTGATCGGCTCCGA
CGGCTTCGGCTTCGCGCCGGATTTCGTCGGCGAAGGCGACGCGCGCACCGGCGCGTGGGTCAAGATTCCGCAGGTCGGCG
GCGTGAAGGTCGGCCCCGACGTCGAGATCGGCGCGAACACGACGATCGACCGCGGCGCGATGGCGGACACCGTCATCGAC
GAATGCGTGAAGATCGACAATCTCGTGCAGATCGGCCACAACTGCCGGATCGGCGCCTACACGGTGATCGCCGGCTGCGC
GGGCATCGCGGGCAGCACGACGATCGGCAAGCACTGCATGATCGGCGGCGCGGTCGGCATCGCCGGGCACGTGACGCTCG
GCGATTACGTGATCGTTACCGCGAAGTCGGGCGTGTCGAAATCGCTGCCGAAGGCGGGCATCTATACGAGCGCGTTTCCG
GCCGTCGAGCACGGCGACTGGAACCGGAGCGCGGCGCTCGTGCGCAACCTGGACAAGCTGCGCGATCGGATCAAGGCGCT
CGAAACCGCGCTGGTCGCGCGGGAAGGCGACGCCGGCGGCGCATGA

Upstream 100 bases:

>100_bases
GAAGCGGTGTACGTGAGCCCGCGCATCGACATCACCGACAAGGTGCTGAAGGCGCTCGCATCGCCTTCGAGCCTGTCGAA
CTGAACGGAGCGAACGTCGA

Downstream 100 bases:

>100_bases
ATCCACGTCGGCCGCAACCGCGCGACGCAGCACTCGCAGGCTGCCCGCCGCACCGGCCGATCGAACCGCGCGCCGCTTTC
CCCGACGCGGCCCGCATCAG

Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Products: UDP-2,3-Bis(3-Hydroxytetradecanoyl)Glucosamine; [Acyl-Carrier Protein]. [C]

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MALTLEALAARFGGEIVGDGRCEVGALAPLDQAGPRQLAFLANPKYLAQVETTGAGAVLIAPGDLEKLGAAAHGRNFIVT
PNPYAYFARVAQMFIDLAAPPRAAGVHPSATIDPAAQVAASAVIGPHVTVEAGAVIGERAQLDANVFVGRGTRIGDDSHL
YPNVAIYHGCTLGPRAIVHSGAVIGSDGFGFAPDFVGEGDARTGAWVKIPQVGGVKVGPDVEIGANTTIDRGAMADTVID
ECVKIDNLVQIGHNCRIGAYTVIAGCAGIAGSTTIGKHCMIGGAVGIAGHVTLGDYVIVTAKSGVSKSLPKAGIYTSAFP
AVEHGDWNRSAALVRNLDKLRDRIKALETALVAREGDAGGA

Sequences:

>Translated_361_residues
MALTLEALAARFGGEIVGDGRCEVGALAPLDQAGPRQLAFLANPKYLAQVETTGAGAVLIAPGDLEKLGAAAHGRNFIVT
PNPYAYFARVAQMFIDLAAPPRAAGVHPSATIDPAAQVAASAVIGPHVTVEAGAVIGERAQLDANVFVGRGTRIGDDSHL
YPNVAIYHGCTLGPRAIVHSGAVIGSDGFGFAPDFVGEGDARTGAWVKIPQVGGVKVGPDVEIGANTTIDRGAMADTVID
ECVKIDNLVQIGHNCRIGAYTVIAGCAGIAGSTTIGKHCMIGGAVGIAGHVTLGDYVIVTAKSGVSKSLPKAGIYTSAFP
AVEHGDWNRSAALVRNLDKLRDRIKALETALVAREGDAGGA
>Mature_360_residues
ALTLEALAARFGGEIVGDGRCEVGALAPLDQAGPRQLAFLANPKYLAQVETTGAGAVLIAPGDLEKLGAAAHGRNFIVTP
NPYAYFARVAQMFIDLAAPPRAAGVHPSATIDPAAQVAASAVIGPHVTVEAGAVIGERAQLDANVFVGRGTRIGDDSHLY
PNVAIYHGCTLGPRAIVHSGAVIGSDGFGFAPDFVGEGDARTGAWVKIPQVGGVKVGPDVEIGANTTIDRGAMADTVIDE
CVKIDNLVQIGHNCRIGAYTVIAGCAGIAGSTTIGKHCMIGGAVGIAGHVTLGDYVIVTAKSGVSKSLPKAGIYTSAFPA
VEHGDWNRSAALVRNLDKLRDRIKALETALVAREGDAGGA

Specific function: Lipid A biosynthesis; third step. [C]

COG id: COG1044

COG function: function code M; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. LpxD subfamily

Homologues:

Organism=Escherichia coli, GI1786376, Length=347, Percent_Identity=39.7694524495677, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPXD_BURM7 (A3MKT2)

Other databases:

- EMBL:   CP000548
- RefSeq:   YP_001080868.1
- ProteinModelPortal:   A3MKT2
- GeneID:   4894134
- GenomeReviews:   CP000548_GR
- KEGG:   bmn:BMA10247_1317
- TIGR:   BMA10247_1317
- HOGENOM:   HBG469615
- OMA:   VQIGRVI
- ProtClustDB:   PRK00892
- BioCyc:   BMAL320389:BMA10247_1317-MONOMER
- HAMAP:   MF_00523
- InterPro:   IPR018357
- InterPro:   IPR011004
- InterPro:   IPR007691
- InterPro:   IPR020573
- TIGRFAMs:   TIGR01853

Pfam domain/function: PF04613 LpxD; SSF51161 Trimer_LpxA_like

EC number: 2.3.1.- [C]

Molecular weight: Translated: 36796; Mature: 36665

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTLEALAARFGGEIVGDGRCEVGALAPLDQAGPRQLAFLANPKYLAQVETTGAGAVLI
CEEEHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEEE
APGDLEKLGAAAHGRNFIVTPNPYAYFARVAQMFIDLAAPPRAAGVHPSATIDPAAQVAA
CCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
SAVIGPHVTVEAGAVIGERAQLDANVFVGRGTRIGDDSHLYPNVAIYHGCTLGPRAIVHS
HHHCCCCEEEECCCEECCCCEECCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHCC
GAVIGSDGFGFAPDFVGEGDARTGAWVKIPQVGGVKVGPDVEIGANTTIDRGAMADTVID
CCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEECCCCCCCCCHHHHHHHH
ECVKIDNLVQIGHNCRIGAYTVIAGCAGIAGSTTIGKHCMIGGAVGIAGHVTLGDYVIVT
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCEEEEE
AKSGVSKSLPKAGIYTSAFPAVEHGDWNRSAALVRNLDKLRDRIKALETALVAREGDAGG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
A
C
>Mature Secondary Structure 
ALTLEALAARFGGEIVGDGRCEVGALAPLDQAGPRQLAFLANPKYLAQVETTGAGAVLI
EEEHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEEE
APGDLEKLGAAAHGRNFIVTPNPYAYFARVAQMFIDLAAPPRAAGVHPSATIDPAAQVAA
CCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
SAVIGPHVTVEAGAVIGERAQLDANVFVGRGTRIGDDSHLYPNVAIYHGCTLGPRAIVHS
HHHCCCCEEEECCCEECCCCEECCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHCC
GAVIGSDGFGFAPDFVGEGDARTGAWVKIPQVGGVKVGPDVEIGANTTIDRGAMADTVID
CCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCEECCCCCCCCCHHHHHHHH
ECVKIDNLVQIGHNCRIGAYTVIAGCAGIAGSTTIGKHCMIGGAVGIAGHVTLGDYVIVT
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCEEEEE
AKSGVSKSLPKAGIYTSAFPAVEHGDWNRSAALVRNLDKLRDRIKALETALVAREGDAGG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-3-O-(3-Hydroxytetradecanoyl)Glucosamine; (R)-3-Hydroxytetradecanoyl-[Acyl-Carrier Protein] [C]

Specific reaction: UDP-3-O-(3-Hydroxytetradecanoyl)Glucosamine + (R)-3-Hydroxytetradecanoyl-[Acyl-Carrier Protein] = UDP-2,3-Bis(3-Hydroxytetradecanoyl)Glucosamine + [Acyl-Carrier Protein]. [C]

General reaction: Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA