| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453205
Identifier: 126453205
GI number: 126453205
Start: 1706883
End: 1708079
Strand: Reverse
Name: 126453205
Synonym: BURPS1106A_1746
Alternate gene names: NA
Gene position: 1708079-1706883 (Counterclockwise)
Preceding gene: 126452398
Following gene: 126454741
Centisome position: 42.83
GC content: 66.25
Gene sequence:
>1197_bases ATGCCCCTCAAGATCGCGTGGTACACCGCGGCACTCGCCGCGACGCTTGCCGCATGCGGTGGCGGTGGCGGCGGCTCGAC GACATCGAACCCGAACGGCACTGGCGTCACGCCGTCCAGCGCGGCGAACGTGCAACCCGTGACGGCGTCCGCGGGCATCA CCGGCGCCGCGAACATGCTGATGACGAGCGTCACCGTTTGCGTGCCGAATACGAACCAATGCCAGACGATCGACAACGTG CAGGTGGATACCGGCTCGGACGGCTTGCGCATCCTTGCGGCCGCGCTGCCGTCGAGCGTCGCGCTACCTGTCGTGCCGGC CGCGAATGCGCCGATCACGGGCGCGTGCGCGATATTCGGCACGGGCTTTACATGGGGCGCGGTGCGTCGCGCCGATGTGA GGATCGCGGGCGAGATCGCGGCGAACATCCCGATTCAGGTGATCGCCGATTCGAGCACGCCGAACGCGCCCATCGACTGC ACGCAGAGCGCCGGGCCCATGCAAACGCAAGGGGCGCTGCGTGCGAACGGCATCCTCGGCATCGGCCTCTTCGTCACCGA CTGCGGCACTGCTTGCGCCAACAGCGCGCTGCCCGGCTGGTATTACGGGTGCACGACGAGCGGCACATGCGCAAGCACAT CGCAACCGATCGCGCAGCAAATTGCGAATCCGATCGGCGCATTCGCGAGCGACAACAACGGCTCGATAATCGTGCTGCCC GCGATTTCACCGACCGGCGCGGCGACGGTCAACGGCTCGCTGATCTTCGGCATCGGCACCCAGGCGAACAACGGGCTCGG CACCGCTACGCCGCTCGTGACGACCGCATCGGACGCTTACGTGACGAGCGTGCTCAACGGCAACACCAACGCGCGCACGT TCTTCGATAGCGGCTCGAACGGGATCTTCTTCGCGGACGCGTCGCTGCCGCAGTGCGGTTCGTGGTTCTGCCCGGCGAGC ACGCAGACGTTCGACATCACGCTGAGCAGCGGCAACGGCGCGTCGAAAGCGACGACGTTCCAGGTCGCGAGTTCGCAGGT GCTGTTCTCGACGTTCAACTTCGCCTTCAACGACCTTGCCGGGCCGATCGGTAATGTCGTCGATCTCGGACTGTCGTTCT TCTATGGGCGCAACGTCTATACGGCGCTCGAAGGCAGCGCGACGCCGGCAGGCCCGGGGCCGTACTACGCGTACTGA
Upstream 100 bases:
>100_bases GAAGCCGGCGGCCGCATGCGCGCGTATGTGGGCCGCGCGTGGCTGCCCGGCGCGGTGCCGCCCGGCGTGTCGATCGACGA CTTGCGGTGAGGAGACGGCC
Downstream 100 bases:
>100_bases ACGCTGAGCGGAACGTGCGCCGCCCGGTTGGGGACGCCGCGCTGCCTCGCCGGCGAGGCAGCGCGCCCCGTCGATCCGCA TTGACCGATACACATCGATC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPLKIAWYTAALAATLAACGGGGGGSTTSNPNGTGVTPSSAANVQPVTASAGITGAANMLMTSVTVCVPNTNQCQTIDNV QVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDC TQSAGPMQTQGALRANGILGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIVLP AISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSNGIFFADASLPQCGSWFCPAS TQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY
Sequences:
>Translated_398_residues MPLKIAWYTAALAATLAACGGGGGGSTTSNPNGTGVTPSSAANVQPVTASAGITGAANMLMTSVTVCVPNTNQCQTIDNV QVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDC TQSAGPMQTQGALRANGILGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIVLP AISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSNGIFFADASLPQCGSWFCPAS TQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY >Mature_397_residues PLKIAWYTAALAATLAACGGGGGGSTTSNPNGTGVTPSSAANVQPVTASAGITGAANMLMTSVTVCVPNTNQCQTIDNVQ VDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFGTGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDCT QSAGPMQTQGALRANGILGIGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIVLPA ISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSNGIFFADASLPQCGSWFCPAST QTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLAGPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39683; Mature: 39551
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKIAWYTAALAATLAACGGGGGGSTTSNPNGTGVTPSSAANVQPVTASAGITGAANML CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH MTSVTVCVPNTNQCQTIDNVQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFG EEEEEEEECCCCCCEEECCEEEECCCCCHHHHEECCCCCCCEEEEECCCCCCCEEEEEEE TGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDCTQSAGPMQTQGALRANGILG CCCCCCCEEEECEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEE IGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIVLP EEEEEECCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE AISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSN CCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCC GIFFADASLPQCGSWFCPASTQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLA EEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEHHHHHHHHHHC GPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PLKIAWYTAALAATLAACGGGGGGSTTSNPNGTGVTPSSAANVQPVTASAGITGAANML CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH MTSVTVCVPNTNQCQTIDNVQVDTGSDGLRILAAALPSSVALPVVPAANAPITGACAIFG EEEEEEEECCCCCCEEECCEEEECCCCCHHHHEECCCCCCCEEEEECCCCCCCEEEEEEE TGFTWGAVRRADVRIAGEIAANIPIQVIADSSTPNAPIDCTQSAGPMQTQGALRANGILG CCCCCCCEEEECEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEE IGLFVTDCGTACANSALPGWYYGCTTSGTCASTSQPIAQQIANPIGAFASDNNGSIIVLP EEEEEECCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE AISPTGAATVNGSLIFGIGTQANNGLGTATPLVTTASDAYVTSVLNGNTNARTFFDSGSN CCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCC GIFFADASLPQCGSWFCPASTQTFDITLSSGNGASKATTFQVASSQVLFSTFNFAFNDLA EEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCCCEEEEEEECCEEEEHHHHHHHHHHC GPIGNVVDLGLSFFYGRNVYTALEGSATPAGPGPYYAY CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA