| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452398
Identifier: 126452398
GI number: 126452398
Start: 1708090
End: 1708581
Strand: Reverse
Name: 126452398
Synonym: BURPS1106A_1747
Alternate gene names: NA
Gene position: 1708581-1708090 (Counterclockwise)
Preceding gene: 126451601
Following gene: 126453205
Centisome position: 42.84
GC content: 70.73
Gene sequence:
>492_bases ATGAACAACAAGAAGTCCTCTCCCCCGACGCGGCGCAGACCGACGCGCGCCCTTGTCGCTGCCGCCGCCGTCACGTTCGC CCCCGTCACTGCGCAATCGCAGCTCGGCAGCACAGTCGCGAGTCCGTCGGCGCGCGCGCTTGTTCAGGCGTCGTCAGCGA CGCTGCCGAACGGTGCCGTCACGATGCGCAGCTATGTCGACGCCGGCGGCACGACGATTCACGAGTACGCGACGCGCGCC GGACTCGTCTTCGCTTACACATGGGACGGCCCGACGTCGCCGAACCTGAGGAAACTGCTCGGCGAACGCTTCCCGACCTT CCAGAGCCACGCCGTCACGACGGACGCGCACGCCCGCGCGAGCCTCCACGCCGGGCGCGTCGCGCAATCCGACTTCGTCG TCGAAGCCGGCGGCCGCATGCGCGCGTATGTGGGCCGCGCGTGGCTGCCCGGCGCGGTGCCGCCCGGCGTGTCGATCGAC GACTTGCGGTGA
Upstream 100 bases:
>100_bases AGCATCCGATTTCCGCAATTTCAGGCGCCGCGCGCGCCGGCACTCACTATCATGAATTGAACAGTGACCCCAACCGTATC CATTTGCGGAGGGCTGTCGC
Downstream 100 bases:
>100_bases GGAGACGGCCATGCCCCTCAAGATCGCGTGGTACACCGCGGCACTCGCCGCGACGCTTGCCGCATGCGGTGGCGGTGGCG GCGGCTCGACGACATCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNNKKSSPPTRRRPTRALVAAAAVTFAPVTAQSQLGSTVASPSARALVQASSATLPNGAVTMRSYVDAGGTTIHEYATRA GLVFAYTWDGPTSPNLRKLLGERFPTFQSHAVTTDAHARASLHAGRVAQSDFVVEAGGRMRAYVGRAWLPGAVPPGVSID DLR
Sequences:
>Translated_163_residues MNNKKSSPPTRRRPTRALVAAAAVTFAPVTAQSQLGSTVASPSARALVQASSATLPNGAVTMRSYVDAGGTTIHEYATRA GLVFAYTWDGPTSPNLRKLLGERFPTFQSHAVTTDAHARASLHAGRVAQSDFVVEAGGRMRAYVGRAWLPGAVPPGVSID DLR >Mature_163_residues MNNKKSSPPTRRRPTRALVAAAAVTFAPVTAQSQLGSTVASPSARALVQASSATLPNGAVTMRSYVDAGGTTIHEYATRA GLVFAYTWDGPTSPNLRKLLGERFPTFQSHAVTTDAHARASLHAGRVAQSDFVVEAGGRMRAYVGRAWLPGAVPPGVSID DLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17144; Mature: 17144
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKKSSPPTRRRPTRALVAAAAVTFAPVTAQSQLGSTVASPSARALVQASSATLPNGAV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHCCCCHHHHEECCCCCCCCCCC TMRSYVDAGGTTIHEYATRAGLVFAYTWDGPTSPNLRKLLGERFPTFQSHAVTTDAHARA HHHHHHCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHH SLHAGRVAQSDFVVEAGGRMRAYVGRAWLPGAVPPGVSIDDLR HHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNKKSSPPTRRRPTRALVAAAAVTFAPVTAQSQLGSTVASPSARALVQASSATLPNGAV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHCCCCHHHHEECCCCCCCCCCC TMRSYVDAGGTTIHEYATRAGLVFAYTWDGPTSPNLRKLLGERFPTFQSHAVTTDAHARA HHHHHHCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHH SLHAGRVAQSDFVVEAGGRMRAYVGRAWLPGAVPPGVSIDDLR HHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA