| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453198
Identifier: 126453198
GI number: 126453198
Start: 2990216
End: 2990683
Strand: Direct
Name: 126453198
Synonym: BURPS1106A_3060
Alternate gene names: NA
Gene position: 2990216-2990683 (Clockwise)
Preceding gene: 126452372
Following gene: 126454859
Centisome position: 74.97
GC content: 71.58
Gene sequence:
>468_bases ATGACGCGCGGCGAACGGCCCGCGCGGCCAGGCGTTCGCGCGCGCCGCATCCGAGCGCGTGGCCGGCGGCGCACCGTGCG CATGCCGCCGGTGACGCAAACCGATCCGCCCGGCGAGACAACCGTGAAAGACAAACGGTTCATTCTGCGTCCGGGCTTCT ACGACGGCGCGCAAGGCCCGTTCTACCGCGGCGATTCGGTGGCGGTCGAGGGGCTGCTGAGCTGCTTTGCGCCGTTGCGC GACGCGGTGGACGTCGAGTACATCGACGCGCCGCGCCCGCGCCATGCGCTCGTCGCGCTGATCGGCGAAGCGCACCAGTC CGCGCCGGTGATCGTGCTCGGCGCAGGCCGCACGCCGAAGGCTCCGTCGATCGCCGTACGCGAGCACGACGGCACGCGCT TCATCGATTCGCCCGCCGACATCCGCCGCTATCTGTCGTCGCAGTACGGCGTCGCGCACGCGTCCTGA
Upstream 100 bases:
>100_bases TCGCGCGCGGCCGCTTCGACGGAAACGGCCCGGTGCTGTTCGTGCATACGGGCGGCGCGCCCGCGCTGTTCGCGTATCAG GACGCGTGCCGCGCGAGCCG
Downstream 100 bases:
>100_bases TCGCGCGGGGTCCCGCGCACGCCGAGCCGGAACGCATGCGGAGCGCATGCTCGACGCGGCGCGCGGGCACGGCGCGGGCC ATGCGTGGGCGCCGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTRGERPARPGVRARRIRARGRRRTVRMPPVTQTDPPGETTVKDKRFILRPGFYDGAQGPFYRGDSVAVEGLLSCFAPLR DAVDVEYIDAPRPRHALVALIGEAHQSAPVIVLGAGRTPKAPSIAVREHDGTRFIDSPADIRRYLSSQYGVAHAS
Sequences:
>Translated_155_residues MTRGERPARPGVRARRIRARGRRRTVRMPPVTQTDPPGETTVKDKRFILRPGFYDGAQGPFYRGDSVAVEGLLSCFAPLR DAVDVEYIDAPRPRHALVALIGEAHQSAPVIVLGAGRTPKAPSIAVREHDGTRFIDSPADIRRYLSSQYGVAHAS >Mature_154_residues TRGERPARPGVRARRIRARGRRRTVRMPPVTQTDPPGETTVKDKRFILRPGFYDGAQGPFYRGDSVAVEGLLSCFAPLRD AVDVEYIDAPRPRHALVALIGEAHQSAPVIVLGAGRTPKAPSIAVREHDGTRFIDSPADIRRYLSSQYGVAHAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17039; Mature: 16907
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGERPARPGVRARRIRARGRRRTVRMPPVTQTDPPGETTVKDKRFILRPGFYDGAQGP CCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC FYRGDSVAVEGLLSCFAPLRDAVDVEYIDAPRPRHALVALIGEAHQSAPVIVLGAGRTPK CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC APSIAVREHDGTRFIDSPADIRRYLSSQYGVAHAS CCEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRGERPARPGVRARRIRARGRRRTVRMPPVTQTDPPGETTVKDKRFILRPGFYDGAQGP CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC FYRGDSVAVEGLLSCFAPLRDAVDVEYIDAPRPRHALVALIGEAHQSAPVIVLGAGRTPK CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC APSIAVREHDGTRFIDSPADIRRYLSSQYGVAHAS CCEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA