| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454859
Identifier: 126454859
GI number: 126454859
Start: 2992234
End: 2992731
Strand: Direct
Name: 126454859
Synonym: BURPS1106A_3062
Alternate gene names: NA
Gene position: 2992234-2992731 (Clockwise)
Preceding gene: 126453198
Following gene: 126451465
Centisome position: 75.02
GC content: 66.47
Gene sequence:
>498_bases TTGCTGACGAGCGGCGATATCCGCAAGGACGCGCCCTTTTTCGGAACGCTCGGCGTGCTGATAGGCGTCGCGCAGCTCGT CGGCTTCCGCTGCTTCCACAAGGCCGACTGGGGCACGAAGCTCCTGTTCGAGCACATCGTGTTCGACACGCTCGTCGTCG CGCTGATCGTCGTCTGGCTCGCCCGGATCCCGACCGAATGGCTGCGCATCGAGCGCAAACGGGAATTTCCGATGCTCGAC AAGCTGATCGCCCACGTCGCGCGACGCGCGGCGTCGTTCGCGGTGACCGCCGCCTCGGTCGTCGCCGGCGTGGCGGCAGT GGCCGCGCTGTCGGGCAGCCCTGTCCATGCAGTCAAGTTCGCTTTTTTCTGCGCCTATCTGCTGTCCATCGGGGAAGCCG TGCTCAACCCGCTCATCGCGCCCGGGCAGTCGCGCCTGAACGGCGTCGCGAAGGCCCTCCTGATCGGCATGCCGCTCGGG TTCCAACTGGCGGATTGA
Upstream 100 bases:
>100_bases CTTCGTCCGGCCGCCGCACGCGCCGCCGCACGGGTATATTGCGGGTTCCACACGAAGCGACGGGGGCATCGCGATGCAAC GCGACAGGCACACACGCTGG
Downstream 100 bases:
>100_bases CGAAACCGGCGGGCCGGCGCCCCGCACCCGCGCGCGGGCTGGCCCGCGCTTCGGTTAAGCTCGCGCTGTCCGTTCAATTC ATCCTCCTCCGTTCGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLTSGDIRKDAPFFGTLGVLIGVAQLVGFRCFHKADWGTKLLFEHIVFDTLVVALIVVWLARIPTEWLRIERKREFPMLD KLIAHVARRAASFAVTAASVVAGVAAVAALSGSPVHAVKFAFFCAYLLSIGEAVLNPLIAPGQSRLNGVAKALLIGMPLG FQLAD
Sequences:
>Translated_165_residues MLTSGDIRKDAPFFGTLGVLIGVAQLVGFRCFHKADWGTKLLFEHIVFDTLVVALIVVWLARIPTEWLRIERKREFPMLD KLIAHVARRAASFAVTAASVVAGVAAVAALSGSPVHAVKFAFFCAYLLSIGEAVLNPLIAPGQSRLNGVAKALLIGMPLG FQLAD >Mature_165_residues MLTSGDIRKDAPFFGTLGVLIGVAQLVGFRCFHKADWGTKLLFEHIVFDTLVVALIVVWLARIPTEWLRIERKREFPMLD KLIAHVARRAASFAVTAASVVAGVAAVAALSGSPVHAVKFAFFCAYLLSIGEAVLNPLIAPGQSRLNGVAKALLIGMPLG FQLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17726; Mature: 17726
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSGDIRKDAPFFGTLGVLIGVAQLVGFRCFHKADWGTKLLFEHIVFDTLVVALIVVWL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARIPTEWLRIERKREFPMLDKLIAHVARRAASFAVTAASVVAGVAAVAALSGSPVHAVKF HHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AFFCAYLLSIGEAVLNPLIAPGQSRLNGVAKALLIGMPLGFQLAD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure MLTSGDIRKDAPFFGTLGVLIGVAQLVGFRCFHKADWGTKLLFEHIVFDTLVVALIVVWL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARIPTEWLRIERKREFPMLDKLIAHVARRAASFAVTAASVVAGVAAVAALSGSPVHAVKF HHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AFFCAYLLSIGEAVLNPLIAPGQSRLNGVAKALLIGMPLGFQLAD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA