| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453179
Identifier: 126453179
GI number: 126453179
Start: 2352205
End: 2352630
Strand: Direct
Name: 126453179
Synonym: BURPS1106A_2381
Alternate gene names: NA
Gene position: 2352205-2352630 (Clockwise)
Preceding gene: 126454933
Following gene: 126452073
Centisome position: 58.98
GC content: 71.6
Gene sequence:
>426_bases GTGGTCAAGCGCGCGATCATCTGCGTCGGCGACACGACGACACACGGCGGCAAGGTGCTCGAAGGCGCCCCGACGTTCAC GCTCAACGGACGCAATGTGGCCGGCGTCGGCCACCAGGTACTTTGCCCTCGCTGCAAGGGCATTTTCCCCATCCTCCCCG ATCTGCTCGGCCGCCGCTACCCGCACACGATCGGCGAGCGCGACACCGCCGTCGAGGGCATGCGCACGGCCTGCGGCGCG GAGTTGATCGCATCGCAGGGCACCGGAACGATCGACGACGTCGGCGCGGGCGAGCGCGGAGACGGCGGCTCGCCCGGCGG ATCGGCAGCCGCGGCGGCGGCCGCGGTCGCCCCTTCCCCCACGCTCTGCCTCGAATGCCTGAAGGCGGCGGCCAAGAACG CCGCGACGATGGTCGCACGCGGATGA
Upstream 100 bases:
>100_bases CTGGCAGAACTGACAGGTGTCGTGACTGCACAACCGTAACAGTCGCCCGCCGGGCGCGCTCGATGGTAAATTTGCACGCC AATTTCCATGAGAGGGCCCA
Downstream 100 bases:
>100_bases TGACGCCGCCGAATATCGAAGCGCATTTCGAGATGCGCCGTCAGCAGATCACGTTGCCCGCGCGGCTCTTCGCGGTGGTC GACGCGCTGCTCTTCGCCGA
Product: PAAR motif-containing protein
Products: NA
Alternate protein names: PAAR Motif Family; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; PAAR Motif-Containing Protein; Bacteriophage
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAAVAPSPTLCLECLKAAAKNAATMVARG
Sequences:
>Translated_141_residues MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAAVAPSPTLCLECLKAAAKNAATMVARG >Mature_141_residues MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGA ELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAAVAPSPTLCLECLKAAAKNAATMVARG
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14082; Mature: 14082
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRY CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCCEECCCCCCCCHHHHHHHCCCC PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAAVAPSP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCH TLCLECLKAAAKNAATMVARG HHHHHHHHHHHCCHHHEEECC >Mature Secondary Structure MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHQVLCPRCKGIFPILPDLLGRRY CCCCEEEEECCCCCCCCEEECCCCEEEECCCEECCCCCCEECCCCCCCCHHHHHHHCCCC PHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPGGSAAAAAAAVAPSP CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCH TLCLECLKAAAKNAATMVARG HHHHHHHHHHHCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA