| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452073
Identifier: 126452073
GI number: 126452073
Start: 2352627
End: 2353133
Strand: Direct
Name: 126452073
Synonym: BURPS1106A_2382
Alternate gene names: NA
Gene position: 2352627-2353133 (Clockwise)
Preceding gene: 126453179
Following gene: 126453014
Centisome position: 58.99
GC content: 69.63
Gene sequence:
>507_bases ATGATGACGCCGCCGAATATCGAAGCGCATTTCGAGATGCGCCGTCAGCAGATCACGTTGCCCGCGCGGCTCTTCGCGGT GGTCGACGCGCTGCTCTTCGCCGAAGCGTCCGACGCGCCGCCGCTGCGTCGCGCGAACTATTCGATCGCGCTGTTCGACC GCACGCCCGACGCATCGCTCGCCGAGCACGGCCCGTGGCTGATCGATTACGCGCTCGCGCCGGGGCCGATTCGGCGCGTG CTCGCCGAGCTCGCGGCCGGGCCGGTCGGCATGTCGTGGCTGATCAGCGCGTATCCGTTCGAGCGGCTGGCCGCCGAGCT GCGCGAGCACCTCGACGTGCGGTTGCCGGACGGCCGCACCGCGCTGCTCCGGTTCTACGACGCGCGCATCATGCCCGACA TCGCGCGCGTGATGCGCGACGCGCAGCGCTCGCATTTCTTCGTCGCGACGTACGACTGGCTCGTCGAGATCGACGGGCGG CTGACCGGAGTGCATCCGCATGCTTGA
Upstream 100 bases:
>100_bases CGGCAGCCGCGGCGGCGGCCGCGGTCGCCCCTTCCCCCACGCTCTGCCTCGAATGCCTGAAGGCGGCGGCCAAGAACGCC GCGACGATGGTCGCACGCGG
Downstream 100 bases:
>100_bases ACTGAGCGCAGAACAGGTGGCCGGACTGGCGCAGATCGACGAGCGCGGCTTCGTCGAGCGCGTTCGGCAGGATCTCGTGA AGGAGAATCCGGCGTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMTPPNIEAHFEMRRQQITLPARLFAVVDALLFAEASDAPPLRRANYSIALFDRTPDASLAEHGPWLIDYALAPGPIRRV LAELAAGPVGMSWLISAYPFERLAAELREHLDVRLPDGRTALLRFYDARIMPDIARVMRDAQRSHFFVATYDWLVEIDGR LTGVHPHA
Sequences:
>Translated_168_residues MMTPPNIEAHFEMRRQQITLPARLFAVVDALLFAEASDAPPLRRANYSIALFDRTPDASLAEHGPWLIDYALAPGPIRRV LAELAAGPVGMSWLISAYPFERLAAELREHLDVRLPDGRTALLRFYDARIMPDIARVMRDAQRSHFFVATYDWLVEIDGR LTGVHPHA >Mature_168_residues MMTPPNIEAHFEMRRQQITLPARLFAVVDALLFAEASDAPPLRRANYSIALFDRTPDASLAEHGPWLIDYALAPGPIRRV LAELAAGPVGMSWLISAYPFERLAAELREHLDVRLPDGRTALLRFYDARIMPDIARVMRDAQRSHFFVATYDWLVEIDGR LTGVHPHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18986; Mature: 18986
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPPNIEAHFEMRRQQITLPARLFAVVDALLFAEASDAPPLRRANYSIALFDRTPDASL CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCH AEHGPWLIDYALAPGPIRRVLAELAAGPVGMSWLISAYPFERLAAELREHLDVRLPDGRT HHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCEECCCCHH ALLRFYDARIMPDIARVMRDAQRSHFFVATYDWLVEIDGRLTGVHPHA HHHHHHHHHCCHHHHHHHHHHHHCEEEEEEEEEEEEECCEEECCCCCC >Mature Secondary Structure MMTPPNIEAHFEMRRQQITLPARLFAVVDALLFAEASDAPPLRRANYSIALFDRTPDASL CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCH AEHGPWLIDYALAPGPIRRVLAELAAGPVGMSWLISAYPFERLAAELREHLDVRLPDGRT HHCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHCCEECCCCHH ALLRFYDARIMPDIARVMRDAQRSHFFVATYDWLVEIDGRLTGVHPHA HHHHHHHHHCCHHHHHHHHHHHHCEEEEEEEEEEEEECCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA