| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453104
Identifier: 126453104
GI number: 126453104
Start: 835501
End: 835923
Strand: Direct
Name: 126453104
Synonym: BURPS1106A_0854
Alternate gene names: NA
Gene position: 835501-835923 (Clockwise)
Preceding gene: 126453300
Following gene: 126451873
Centisome position: 20.95
GC content: 70.21
Gene sequence:
>423_bases ATGCGACAGCAAAGCGTTTCCCAATACCTGATCGCGGCGGCGCTGGCCTTCGGCCTCGCGGGCGTCGCGCGCGCGCAGCC CGGTCTGCCCGACGTGCAGCACCACGGCGACGTCGGCTTCGTGTCGGGCGGCGTGGGGCTCGACGAGTCCACCGCGTTCC AGCGCAGCGAAAGCAGCTGGCCGCTCGCGCTGCGCTTCACGGGCGCAGGCGGCGAGTATCTGTCCGACGTTCACGTGTCC GTGCTCGATGCGCGAGGCGGCGAAGTGCTGAAGACCGATGCGCGCGGCCCCTACATGCTCGTCAGGCTCAAGCCGGGGCG CTATACCGTGCGCGCGAGCTACAACGGCAGCGAGCAGACCCATGCGGTCACGGTGCCGGCGAAGGGCGGCACGAAGGCGG CGTTCTCGTGGAAGGCGCAGTGA
Upstream 100 bases:
>100_bases GCGGCGGCCTGCCGCGCTGCGCGGGCGGACGCCGCCCATCGTTTTCGCCAGCGGCCCGGCGGGGCCGCCGGCTTCGGCCG GCAGATTCAAGGAGCGAATC
Downstream 100 bases:
>100_bases TCCCGCCGCGGCGATGACGACGCGCAATTTGCGGCGGTTTGGCCGATAATGCGATAACAAGCGGCGTTTCGCCGCGGCCA TGCCTATTTCCGGCCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRQQSVSQYLIAAALAFGLAGVARAQPGLPDVQHHGDVGFVSGGVGLDESTAFQRSESSWPLALRFTGAGGEYLSDVHVS VLDARGGEVLKTDARGPYMLVRLKPGRYTVRASYNGSEQTHAVTVPAKGGTKAAFSWKAQ
Sequences:
>Translated_140_residues MRQQSVSQYLIAAALAFGLAGVARAQPGLPDVQHHGDVGFVSGGVGLDESTAFQRSESSWPLALRFTGAGGEYLSDVHVS VLDARGGEVLKTDARGPYMLVRLKPGRYTVRASYNGSEQTHAVTVPAKGGTKAAFSWKAQ >Mature_140_residues MRQQSVSQYLIAAALAFGLAGVARAQPGLPDVQHHGDVGFVSGGVGLDESTAFQRSESSWPLALRFTGAGGEYLSDVHVS VLDARGGEVLKTDARGPYMLVRLKPGRYTVRASYNGSEQTHAVTVPAKGGTKAAFSWKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14776; Mature: 14776
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQQSVSQYLIAAALAFGLAGVARAQPGLPDVQHHGDVGFVSGGVGLDESTAFQRSESSW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC PLALRFTGAGGEYLSDVHVSVLDARGGEVLKTDARGPYMLVRLKPGRYTVRASYNGSEQT CEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCE HAVTVPAKGGTKAAFSWKAQ EEEEEECCCCCCEEEEEECC >Mature Secondary Structure MRQQSVSQYLIAAALAFGLAGVARAQPGLPDVQHHGDVGFVSGGVGLDESTAFQRSESSW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC PLALRFTGAGGEYLSDVHVSVLDARGGEVLKTDARGPYMLVRLKPGRYTVRASYNGSEQT CEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCE HAVTVPAKGGTKAAFSWKAQ EEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA