| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452989
Identifier: 126452989
GI number: 126452989
Start: 1983749
End: 1984390
Strand: Direct
Name: 126452989
Synonym: BURPS1106A_2020
Alternate gene names: NA
Gene position: 1983749-1984390 (Clockwise)
Preceding gene: 126454562
Following gene: 126452738
Centisome position: 49.74
GC content: 71.03
Gene sequence:
>642_bases ATGATGCTGCGCCGTCTGCTGTACCGCGAAACGCCGTTCGAGCCGCTCACCGACGCCGAGCTGCGCCGCCTCGAGGCGGC GTTCGGCGAAATGGTCGCGGGCAATCCGCTCATCTATTACTGGGTCCACCGGGTCGACGGCGCGCGCTGGCTGATCACGG ACTTCTTCCATCCGTCGATGCTGCGCTATCGCGGGCTCGAGTTCGTGCTCGTCGAGCGCGGCACGGTTTCGTACTACCGG CTGCCGGGCGCGAGGGTCGGCGGCACGGGCCACGTCGCCGCCGGCGACTATCGCGTGAGCATCACCTCGCCGGCGGGCGC GGCGTTCCTGATCGAGATCCGCAAGAACGCGCTCGGCCGGCTCGAGCTGCTCGGCGTCTCGGCGGCGCCGGCGAGCGGCG CGGCGCCGTCGCACGTCGAACTGCCGCGCCATGCGCTCGAGCCGAGCAAGTTCGCCGACGAGATGAAGGCCGCGATCGCG GGCGGCGTCGAGTGGGTCTACCGGCGCTACCGCAGCGCCGACGATCCCGCGCGGGCCGCGCTCGCGCGCGAGTTGCGCGA CGCCCGTTGGCCGCGCGCGGTGCGCGGCGCGAGCGTCGATGCGGATACCTATTTGTGGATGCTCGAACAATCGATCGCAT GA
Upstream 100 bases:
>100_bases ACCTGGCGATCTACAAGGTGATGGCGTCGACGTCGCTGATCGCCGCGTGCGCGTGCGCGATCTTCGTCGTCGCACGCTGC GTCGACACGAAGGAGCAAGC
Downstream 100 bases:
>100_bases ACGACATCATGACCCAGACATTCGACAGGCCCGCCATCCCGGTGTACGACAGCGTATCCGGCTCGCTCGACCATCCGGAC CTGATCCGGCTCGCGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MMLRRLLYRETPFEPLTDAELRRLEAAFGEMVAGNPLIYYWVHRVDGARWLITDFFHPSMLRYRGLEFVLVERGTVSYYR LPGARVGGTGHVAAGDYRVSITSPAGAAFLIEIRKNALGRLELLGVSAAPASGAAPSHVELPRHALEPSKFADEMKAAIA GGVEWVYRRYRSADDPARAALARELRDARWPRAVRGASVDADTYLWMLEQSIA
Sequences:
>Translated_213_residues MMLRRLLYRETPFEPLTDAELRRLEAAFGEMVAGNPLIYYWVHRVDGARWLITDFFHPSMLRYRGLEFVLVERGTVSYYR LPGARVGGTGHVAAGDYRVSITSPAGAAFLIEIRKNALGRLELLGVSAAPASGAAPSHVELPRHALEPSKFADEMKAAIA GGVEWVYRRYRSADDPARAALARELRDARWPRAVRGASVDADTYLWMLEQSIA >Mature_213_residues MMLRRLLYRETPFEPLTDAELRRLEAAFGEMVAGNPLIYYWVHRVDGARWLITDFFHPSMLRYRGLEFVLVERGTVSYYR LPGARVGGTGHVAAGDYRVSITSPAGAAFLIEIRKNALGRLELLGVSAAPASGAAPSHVELPRHALEPSKFADEMKAAIA GGVEWVYRRYRSADDPARAALARELRDARWPRAVRGASVDADTYLWMLEQSIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23775; Mature: 23775
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRRLLYRETPFEPLTDAELRRLEAAFGEMVAGNPLIYYWVHRVDGARWLITDFFHPSM CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHCCHHH LRYRGLEFVLVERGTVSYYRLPGARVGGTGHVAAGDYRVSITSPAGAAFLIEIRKNALGR HHHCCCEEEEEECCCEEEEECCCCCCCCCCCEECCCEEEEEECCCCCEEEEEEHHCCCCE LELLGVSAAPASGAAPSHVELPRHALEPSKFADEMKAAIAGGVEWVYRRYRSADDPARAA EEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LARELRDARWPRAVRGASVDADTYLWMLEQSIA HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMLRRLLYRETPFEPLTDAELRRLEAAFGEMVAGNPLIYYWVHRVDGARWLITDFFHPSM CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHCCHHH LRYRGLEFVLVERGTVSYYRLPGARVGGTGHVAAGDYRVSITSPAGAAFLIEIRKNALGR HHHCCCEEEEEECCCEEEEECCCCCCCCCCCEECCCEEEEEECCCCCEEEEEEHHCCCCE LELLGVSAAPASGAAPSHVELPRHALEPSKFADEMKAAIAGGVEWVYRRYRSADDPARAA EEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LARELRDARWPRAVRGASVDADTYLWMLEQSIA HHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA