| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yjgA [C]
Identifier: 126452938
GI number: 126452938
Start: 2853012
End: 2853611
Strand: Direct
Name: yjgA [C]
Synonym: BURPS1106A_2906
Alternate gene names: 126452938
Gene position: 2853012-2853611 (Clockwise)
Preceding gene: 126453089
Following gene: 126452929
Centisome position: 71.53
GC content: 69.5
Gene sequence:
>600_bases ATGACACGCAAAACCCGTATCCAACCGATCGAGCACCCCGGCGAGGACGCCGACCACGGCTACGATCGCCCCAGCAAGTC CCAGTTGAAGCGCGACATGCACGCGCTGCAGGAACTGGGCGCCGCCCTCGTCGAGCTGCCGAAGGACGCGTTCAAGCGCA TGCCGATGCCGGAGGATCTCGCCGACGCGGTGCGCGAGGCGCGCCGCATCACCGATCACGAAGGCAAGCGCCGCCAGCTC CAGTACGTCGGGCGCGTGATGCGCTCGCTCAGCGCCGACGAGACGGCCGCGCTGCGCGCGGCGCTCGACGCGCAGCGCGG CGTGAACAAGGCCGAGACGGCCCGCCTGCACTGGATCGAGCGCACGCGCGAGCAACTGCTCGCGAACGACGATGCGCTGA CCGCGTTCGTGCGCGAGCATCCGTCGGCCGACGTGCAGGAAGGCCGCACGCTGATCCGCAACGCGCGCAAGGAGGCGCAG CAAGGCAAGCCGCCGCGCTACTTCCGCGAGCTGTTCCAGTGGATCAAGACGGCGAGCGGCTCGGCGAGCGACGCGCCCGA CCTTTCACCGGATGCCGACGATGACGACGACGAAGCGTAA
Upstream 100 bases:
>100_bases TCCGCGATCATAGCAAGGTCCGGCGCGCGCGACGCGGGTCGGCGACGCGGCGCGCGGCGAGGCGCGGCCATGCGGTGCCC GGCGCGATACAATGCCGCCC
Downstream 100 bases:
>100_bases TCACCCCGACGAACTCGTGATCGGCCTCGTGTCGATCAGCGATCGCGCAAGCAGCGGCGTCTACGAGGACAAGGGCATTC CGGCGCTCGCCGAATGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKRRQL QYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQ QGKPPRYFRELFQWIKTASGSASDAPDLSPDADDDDDEA
Sequences:
>Translated_199_residues MTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKRRQL QYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQ QGKPPRYFRELFQWIKTASGSASDAPDLSPDADDDDDEA >Mature_198_residues TRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKRRQLQ YVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQQ GKPPRYFRELFQWIKTASGSASDAPDLSPDADDDDDEA
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=153, Percent_Identity=39.2156862745098, Blast_Score=105, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 22547; Mature: 22416
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHH ADAVREARRITDHEGKRRQLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH RTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQQGKPPRYFRELFQWIKTASG HHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC SASDAPDLSPDADDDDDEA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRKTRIQPIEHPGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHH ADAVREARRITDHEGKRRQLQYVGRVMRSLSADETAALRAALDAQRGVNKAETARLHWIE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH RTREQLLANDDALTAFVREHPSADVQEGRTLIRNARKEAQQGKPPRYFRELFQWIKTASG HHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC SASDAPDLSPDADDDDDEA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA