| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452904
Identifier: 126452904
GI number: 126452904
Start: 3173777
End: 3174988
Strand: Direct
Name: 126452904
Synonym: BURPS1106A_3266
Alternate gene names: NA
Gene position: 3173777-3174988 (Clockwise)
Preceding gene: 126451475
Following gene: 126453880
Centisome position: 79.57
GC content: 66.34
Gene sequence:
>1212_bases ATGCGACGCGCGAGCGTTCCCACCCTGCTCTTCGCCGCCAGCGCCTGCTTCTTCTCGCTGAACGCGTTCAGCGTGCGCGC GACCTTCGCCGCCTATGCCCTGCTCGCGCTCCTCGCGCTGTTGCGCGCGCCGACGCTGTTCGCACGCCAGCAACGCCTGC CCGCGATCGTCGCGTACTGGCTGCTGAGCGTGAGCAGCGCATTCCTCGTATCGGCGTTCGGTGATTTCTACGCGAACTTC TTCGTCAAGTTCGTGCTGATCCAGACCTACGTCGCACTCGCGTTCTGGCTGTTCGCGAGCGGCGTGCTGGCGATGCGCTC GCTCGAACGGACCTGCGAAACGCTGATCTACGTGCACGCGACGTTCTTCATCGTGCAGCTCGGCTGCTACCTCGCCTTCG GCCACTTCATCGATTTCGACAGCTACATCCGCGAGAGCGATTCGGAAGCGCTCTATGCGACGAAGGCGCTGAGCGACAGC CTCATCTCGATCCGCGCGCTCGGCCTCTATTCGGAACCGTCGTTCTACGCGATGACGGTCGTGCCCGCGGGCGCCATCCT GCTGCTCGCGAAGCGGCGCATGACGGCCGCGACGATCGTCGCGTTCGCAACCGCGCTGCTGTCGTTCTCGATCGCGGCGA TCCTGATCTGCGCGCTGCTCGGCGGCGTGCACTTCCTCGCGGGACGCACGTCGATCCGGATCAAGCTCGTGATCGCCGCG GTCGCGCTCGCGATCGCGCCGGCGATGTACGGCGTGTACGACAAGCGCGTGAATCAGTCCGCCGACTACGACGCACTCGG CAGCCGCACGCTCGTGCTGCGCGAGTTGCGCGAGCGCGACGCACTGGCCGACGTGTTCGGCAGCGGCCTCTTCTGGGACG AGCGGAACAATATCGGCAAGACGCACTTGCGCGGCTACCAGGTGCGCGACAGCTCGTTCTACGTGTATCTGCTGTTCGCA ACCGGCGTAGCCGGCGCGACCGCGTTCGTCGGCGCTTTGTTCATGCTGTTCCGGCGGCGCGGCCGCCGAAGCCTGCTGCC GTACCTGCTGCCGCTTCTCCTCTTCAAGTTTCACGCGCTATACGGCATGCTATGGCTCACGCTGCTGATGTTCGTCGTCG TCGCCGGGCACGCCGAGCGCCTGCCCGAGCGCCGTGAACGGCCTGGTACCGGTACCGGCCGGTTGAGCGCGACCGGCGCA TCGGGCCCCTAG
Upstream 100 bases:
>100_bases CGGCGGCGCACCGATCCGCCGCGCGGGCGCCCGCGCGTAAGGCGCGCAGCGTTCGAGCACGCCGCCCGGCCATGCACGGC CGACGAACCATGGAGTCTTC
Downstream 100 bases:
>100_bases CGTTTGGCCGCGCATGCGCCGACACGCAAAGGAGGATGTCGATGACAACCCGCTGGATGCCGGCTTGCCTGTTCTGCGCG TGCGTCGTGGCATCGTCGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRRASVPTLLFAASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVSAFGDFYANF FVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHATFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDS LISIRALGLYSEPSFYAMTVVPAGAILLLAKRRMTAATIVAFATALLSFSIAAILICALLGGVHFLAGRTSIRIKLVIAA VALAIAPAMYGVYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNIGKTHLRGYQVRDSSFYVYLLFA TGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHALYGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATGA SGP
Sequences:
>Translated_403_residues MRRASVPTLLFAASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVSAFGDFYANF FVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHATFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDS LISIRALGLYSEPSFYAMTVVPAGAILLLAKRRMTAATIVAFATALLSFSIAAILICALLGGVHFLAGRTSIRIKLVIAA VALAIAPAMYGVYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNIGKTHLRGYQVRDSSFYVYLLFA TGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHALYGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATGA SGP >Mature_403_residues MRRASVPTLLFAASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYWLLSVSSAFLVSAFGDFYANF FVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHATFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDS LISIRALGLYSEPSFYAMTVVPAGAILLLAKRRMTAATIVAFATALLSFSIAAILICALLGGVHFLAGRTSIRIKLVIAA VALAIAPAMYGVYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNIGKTHLRGYQVRDSSFYVYLLFA TGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHALYGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATGA SGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44356; Mature: 44356
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRASVPTLLFAASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH LLSVSSAFLVSAFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTV HHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VPAGAILLLAKRRMTAATIVAFATALLSFSIAAILICALLGGVHFLAGRTSIRIKLVIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VALAIAPAMYGVYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNIGK HHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC THLRGYQVRDSSFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHAL HHHCCEEEECCCEEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATGASGP HHHHHHHHHHHHHHHCHHHHCHHHHCCCCCCCCCEECCCCCCC >Mature Secondary Structure MRRASVPTLLFAASACFFSLNAFSVRATFAAYALLALLALLRAPTLFARQQRLPAIVAYW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH LLSVSSAFLVSAFGDFYANFFVKFVLIQTYVALAFWLFASGVLAMRSLERTCETLIYVHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFFIVQLGCYLAFGHFIDFDSYIRESDSEALYATKALSDSLISIRALGLYSEPSFYAMTV HHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VPAGAILLLAKRRMTAATIVAFATALLSFSIAAILICALLGGVHFLAGRTSIRIKLVIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VALAIAPAMYGVYDKRVNQSADYDALGSRTLVLRELRERDALADVFGSGLFWDERNNIGK HHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC THLRGYQVRDSSFYVYLLFATGVAGATAFVGALFMLFRRRGRRSLLPYLLPLLLFKFHAL HHHCCEEEECCCEEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YGMLWLTLLMFVVVAGHAERLPERRERPGTGTGRLSATGASGP HHHHHHHHHHHHHHHCHHHHCHHHHCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA