| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453880
Identifier: 126453880
GI number: 126453880
Start: 3175030
End: 3176202
Strand: Direct
Name: 126453880
Synonym: BURPS1106A_3267
Alternate gene names: NA
Gene position: 3175030-3176202 (Clockwise)
Preceding gene: 126452904
Following gene: 126451699
Centisome position: 79.61
GC content: 68.97
Gene sequence:
>1173_bases ATGACAACCCGCTGGATGCCGGCTTGCCTGTTCTGCGCGTGCGTCGTGGCATCGTCGGCCGCGCAGGTGCCGCCCGCCGC GCCGCCCGGCAGCATCATCGCGCACAGCGCGGCGGCGACGCGCGTGTTCCTCGGCTCTCCGTCGCTCGCGATCCTGCCCG ACGGCACCTATGTCGCATCGCACGACATGTTCGGCCCGGCCGCGCTGCCGGACGAAGTGCGCGTGTTCGCATCGCGCGAC AAGGGGCAGACCTGGGAAAAGCTGAGCGTCGTGACGGGCCAGTACTGGTCGTCGCTGTTCGTCGTCGATGGCGCGCTCTA CCTGATGGGCACCGATCGCTCGATGGGCACGCCGGTGATCCGCCGCTCGACCGACGGCGGCGCGACCTGGACCACCCCGA GCGACCCGCTGACCGGACGCTTCGACGTGAGCGGCCGCTACATCACGGCGCCCGTGCCGGTGCTCATCGAGCGCGGCCGC GTATGGCGCGCGTTCGAAGTGATCGACGGCGGCGATCTGCGCTCGCTCGTGCTGTCCGCCCCCGTCGACGGCGATCTGCT CGACACGCGCAACTGGCGCGCGACGAAGCCGCTGCCGTCCGATCATGCATGGCTCGACGGCAACTTCCTGACGTGGGAGG AAGGCAGCGTCGTCGCGACGGCCGAGCGCGAGCCGGCCGTCGTGCTGCGCGTGAACACGAAGCACGGGCCGGAAAAGGTC GCGCTCGTTCACATGCTGGCCGACGGCCGATCGCTATCGTTCGATCCCGCGCACGATTTCATCGATTTTCCCGGCGGCGG CAAGAAGTTCACGGTCCGCTTCGATGCCCGCTCGGGCCGCTACTGGTCGCTCGCGAATGCGGTGCCGAACGCCGACGGCG GCGCGAATCTCGAGCGCGTGAGAAACACGCTCGCGCTGACGTCGTCGCCCGACCTGCGTCACTGGAGCGTCGAACGCGTG CTGCTGCAAAGCGCGGATGCGCAGCGGCACGGCTTTCAATACGCGGATTGGCAATTCGACGGCGACGACATCGTCGCGGT CGTGCGCATGGCGTTCGACGACGGCGAGGGCGGCGCGCACAGCCAGCACGATTCGAACTATGTGACGTTCGTGCGGGTAC GCGATTTCAGGCACGCGGCGGCGGACAAGCGCGACGGGGCCAAGCCCGATTGA
Upstream 100 bases:
>100_bases GTGAACGGCCTGGTACCGGTACCGGCCGGTTGAGCGCGACCGGCGCATCGGGCCCCTAGCGTTTGGCCGCGCATGCGCCG ACACGCAAAGGAGGATGTCG
Downstream 100 bases:
>100_bases CGGTGGAGCGGCAAAGGAAAGACGACTGAACGCGATAGGGCCGGCGCATGCCGATCCCGACGCGAAGCGGCGCGAGCTTC GTATCGGTGGGTATGCGCCG
Product: BNR/Asp-box repeat-containing protein
Products: NA
Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat Protein
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTTRWMPACLFCACVVASSAAQVPPAAPPGSIIAHSAAATRVFLGSPSLAILPDGTYVASHDMFGPAALPDEVRVFASRD KGQTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVIRRSTDGGATWTTPSDPLTGRFDVSGRYITAPVPVLIERGR VWRAFEVIDGGDLRSLVLSAPVDGDLLDTRNWRATKPLPSDHAWLDGNFLTWEEGSVVATAEREPAVVLRVNTKHGPEKV ALVHMLADGRSLSFDPAHDFIDFPGGGKKFTVRFDARSGRYWSLANAVPNADGGANLERVRNTLALTSSPDLRHWSVERV LLQSADAQRHGFQYADWQFDGDDIVAVVRMAFDDGEGGAHSQHDSNYVTFVRVRDFRHAAADKRDGAKPD
Sequences:
>Translated_390_residues MTTRWMPACLFCACVVASSAAQVPPAAPPGSIIAHSAAATRVFLGSPSLAILPDGTYVASHDMFGPAALPDEVRVFASRD KGQTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVIRRSTDGGATWTTPSDPLTGRFDVSGRYITAPVPVLIERGR VWRAFEVIDGGDLRSLVLSAPVDGDLLDTRNWRATKPLPSDHAWLDGNFLTWEEGSVVATAEREPAVVLRVNTKHGPEKV ALVHMLADGRSLSFDPAHDFIDFPGGGKKFTVRFDARSGRYWSLANAVPNADGGANLERVRNTLALTSSPDLRHWSVERV LLQSADAQRHGFQYADWQFDGDDIVAVVRMAFDDGEGGAHSQHDSNYVTFVRVRDFRHAAADKRDGAKPD >Mature_389_residues TTRWMPACLFCACVVASSAAQVPPAAPPGSIIAHSAAATRVFLGSPSLAILPDGTYVASHDMFGPAALPDEVRVFASRDK GQTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVIRRSTDGGATWTTPSDPLTGRFDVSGRYITAPVPVLIERGRV WRAFEVIDGGDLRSLVLSAPVDGDLLDTRNWRATKPLPSDHAWLDGNFLTWEEGSVVATAEREPAVVLRVNTKHGPEKVA LVHMLADGRSLSFDPAHDFIDFPGGGKKFTVRFDARSGRYWSLANAVPNADGGANLERVRNTLALTSSPDLRHWSVERVL LQSADAQRHGFQYADWQFDGDDIVAVVRMAFDDGEGGAHSQHDSNYVTFVRVRDFRHAAADKRDGAKPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42449; Mature: 42318
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRWMPACLFCACVVASSAAQVPPAAPPGSIIAHSAAATRVFLGSPSLAILPDGTYVAS CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEECCCEEEC HDMFGPAALPDEVRVFASRDKGQTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVI CCCCCCCCCCHHHEEEEECCCCCCHHHHHEEHHHHHHEEEEECCEEEEEECCCCCCCCEE RRSTDGGATWTTPSDPLTGRFDVSGRYITAPVPVLIERGRVWRAFEVIDGGDLRSLVLSA EECCCCCEEECCCCCCCCEEEECCCCEEECCHHHEEECCCEEEEEEEECCCCCEEEEEEC PVDGDLLDTRNWRATKPLPSDHAWLDGNFLTWEEGSVVATAEREPAVVLRVNTKHGPEKV CCCCCEECCCCCEECCCCCCCCCEECCCEEEECCCCEEEEECCCCEEEEEEECCCCCCEE ALVHMLADGRSLSFDPAHDFIDFPGGGKKFTVRFDARSGRYWSLANAVPNADGGANLERV EEEEEEECCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHH RNTLALTSSPDLRHWSVERVLLQSADAQRHGFQYADWQFDGDDIVAVVRMAFDDGEGGAH HHHEEECCCCCCCHHHHHHHHHHCCCHHHCCCEEECEEECCCCEEEEEEEEEECCCCCCC SQHDSNYVTFVRVRDFRHAAADKRDGAKPD CCCCCCEEEEEEEECHHHHHCCCCCCCCCC >Mature Secondary Structure TTRWMPACLFCACVVASSAAQVPPAAPPGSIIAHSAAATRVFLGSPSLAILPDGTYVAS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEECCCEEEC HDMFGPAALPDEVRVFASRDKGQTWEKLSVVTGQYWSSLFVVDGALYLMGTDRSMGTPVI CCCCCCCCCCHHHEEEEECCCCCCHHHHHEEHHHHHHEEEEECCEEEEEECCCCCCCCEE RRSTDGGATWTTPSDPLTGRFDVSGRYITAPVPVLIERGRVWRAFEVIDGGDLRSLVLSA EECCCCCEEECCCCCCCCEEEECCCCEEECCHHHEEECCCEEEEEEEECCCCCEEEEEEC PVDGDLLDTRNWRATKPLPSDHAWLDGNFLTWEEGSVVATAEREPAVVLRVNTKHGPEKV CCCCCEECCCCCEECCCCCCCCCEECCCEEEECCCCEEEEECCCCEEEEEEECCCCCCEE ALVHMLADGRSLSFDPAHDFIDFPGGGKKFTVRFDARSGRYWSLANAVPNADGGANLERV EEEEEEECCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHH RNTLALTSSPDLRHWSVERVLLQSADAQRHGFQYADWQFDGDDIVAVVRMAFDDGEGGAH HHHEEECCCCCCCHHHHHHHHHHCCCHHHCCCEEECEEECCCCEEEEEEEEEECCCCCCC SQHDSNYVTFVRVRDFRHAAADKRDGAKPD CCCCCCEEEEEEEECHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA