| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452895
Identifier: 126452895
GI number: 126452895
Start: 2516561
End: 2517760
Strand: Reverse
Name: 126452895
Synonym: BURPS1106A_2562
Alternate gene names: NA
Gene position: 2517760-2516561 (Counterclockwise)
Preceding gene: 126452905
Following gene: 126452722
Centisome position: 63.13
GC content: 68.75
Gene sequence:
>1200_bases ATGAGCATCATCGAGAACAACGAAGACCTCGGCGTACTGCGGTTCATCACGGCGGGCAGCGTCGACGACGGCAAGCGCGC GTTGATCGGGCGACTGCTGTACGACGGCGAGGCGATGGAGGCCGAGGCGCGCCGCGCACCGCCGCGCGAGACGCGGATGC GCGCCGGCGGCGCCGCGCCCGAACCCGCGTCGGCCCCTCGCACGCACGTCGCGCCCGATCTCGATGCGATGGCGGGCGGG CCGTCGATCGCCGCGGGCGGCCATGTCGGCCGCGACGGCGGGCGCACGTGCGCGAAGCCCGACAGGACGCGCGCGGCGAG CGCGCACGCACCGCCCCGGCGCCTGTTCTCGATCGGCCGCGCGCCGGCCACGTTCGGCGAACTGGTTCAGGGGCGCGAGC CCGCGTCCGGCGACGATTTTCTGATCACGCTGCCGATCACGCTGAGCTCGACTGCCCGATTCTGCCGGTTTCGCGATTCC GATCGCCTGTATGTCTTTCCGGCGAGCAAGAAGAAATCGCTGAAGGCCGCCGCGCTCTTTCTCGAACGATTCGGCATCCT GACGGGCGGCGTCCTGCAGATCTGCAGCGACGTGTCCGAGGGCAAGGGGCTCGCGAGCTCGTCGTCCGACATCGTCGCGA CGCTGCGCGCGCTCGCCGCGTGTTTCGACATCCCGCTTTCTCCCGCCGACATGTGCGCGATCATTCGCGAGATCGAGCCG ACCGACGGCGTGATGTTCGACGAATCGGTCGCGTTCTTCCATCGCCGGGTCGAGCTCGGCAAGGTGATGGGCCGGCTGCC GAAAATCTGCATTCTCGCGATCGACGAGGGCGGCACGATCGATACCGTCGAGTACAACTGCCATCGCTTCGAGTTTTCCC ACGAGGAAGCGGATCAGTACGCGGCGCTGCTCGCCGACGTCGACGCGGCGATCTCGCGCAGCGATGTGCGGCAGATCGGG CGCGCGGCGACGCTCAGCGCGCAAATGCACCAGAAGCGCAACCCGAAGCGAACGCTGCGGCAGCTCGAAGCGCTGATGCG CGAAGTCGGCGCGCACGGCATCGTCAATTGCCACAGCGGCACGTTCATCGGCCTGTGCTTCGATGCGTCGGGCCCCGACG CGCTCGACACGATCGCGCGTGCCGAGCGCACGCTGCGCGACGCGCTTGGCCAACCCATCTCGCGCTTCTTCACCAGGTGA
Upstream 100 bases:
>100_bases GAGCGCGGGGCGACGCGGATGGACGACCAGGCGTCGGAGGCCGCGATGGAGCAGCGCAAGAAGCAGGGCTATTTCTGACG CACGCGAGGACACATCCATC
Downstream 100 bases:
>100_bases GCTCATGACATACGACGCCGCATCGAACAGGAAAATCCGGGCGACCGTCTCCGGTGCGATGGCCGAGCCGCGCATCGTGC AGCTCGCGCCGAATCTTTAC
Product: GHMP kinase domain-containing protein
Products: NA
Alternate protein names: Kinase; Ghmp Kinase; PduX-Like Protein; Propanediol Utilization Kinase PduX; Propanediol Utilization Protein PduX; L-Threonine Kinase; PduX Protein; Cobalamin Biosynthesis Kinase
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSIIENNEDLGVLRFITAGSVDDGKRALIGRLLYDGEAMEAEARRAPPRETRMRAGGAAPEPASAPRTHVAPDLDAMAGG PSIAAGGHVGRDGGRTCAKPDRTRAASAHAPPRRLFSIGRAPATFGELVQGREPASGDDFLITLPITLSSTARFCRFRDS DRLYVFPASKKKSLKAAALFLERFGILTGGVLQICSDVSEGKGLASSSSDIVATLRALAACFDIPLSPADMCAIIREIEP TDGVMFDESVAFFHRRVELGKVMGRLPKICILAIDEGGTIDTVEYNCHRFEFSHEEADQYAALLADVDAAISRSDVRQIG RAATLSAQMHQKRNPKRTLRQLEALMREVGAHGIVNCHSGTFIGLCFDASGPDALDTIARAERTLRDALGQPISRFFTR
Sequences:
>Translated_399_residues MSIIENNEDLGVLRFITAGSVDDGKRALIGRLLYDGEAMEAEARRAPPRETRMRAGGAAPEPASAPRTHVAPDLDAMAGG PSIAAGGHVGRDGGRTCAKPDRTRAASAHAPPRRLFSIGRAPATFGELVQGREPASGDDFLITLPITLSSTARFCRFRDS DRLYVFPASKKKSLKAAALFLERFGILTGGVLQICSDVSEGKGLASSSSDIVATLRALAACFDIPLSPADMCAIIREIEP TDGVMFDESVAFFHRRVELGKVMGRLPKICILAIDEGGTIDTVEYNCHRFEFSHEEADQYAALLADVDAAISRSDVRQIG RAATLSAQMHQKRNPKRTLRQLEALMREVGAHGIVNCHSGTFIGLCFDASGPDALDTIARAERTLRDALGQPISRFFTR >Mature_398_residues SIIENNEDLGVLRFITAGSVDDGKRALIGRLLYDGEAMEAEARRAPPRETRMRAGGAAPEPASAPRTHVAPDLDAMAGGP SIAAGGHVGRDGGRTCAKPDRTRAASAHAPPRRLFSIGRAPATFGELVQGREPASGDDFLITLPITLSSTARFCRFRDSD RLYVFPASKKKSLKAAALFLERFGILTGGVLQICSDVSEGKGLASSSSDIVATLRALAACFDIPLSPADMCAIIREIEPT DGVMFDESVAFFHRRVELGKVMGRLPKICILAIDEGGTIDTVEYNCHRFEFSHEEADQYAALLADVDAAISRSDVRQIGR AATLSAQMHQKRNPKRTLRQLEALMREVGAHGIVNCHSGTFIGLCFDASGPDALDTIARAERTLRDALGQPISRFFTR
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42964; Mature: 42833
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIENNEDLGVLRFITAGSVDDGKRALIGRLLYDGEAMEAEARRAPPRETRMRAGGAAP CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCCCC EPASAPRTHVAPDLDAMAGGPSIAAGGHVGRDGGRTCAKPDRTRAASAHAPPRRLFSIGR CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCC APATFGELVQGREPASGDDFLITLPITLSSTARFCRFRDSDRLYVFPASKKKSLKAAALF CCHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHH LERFGILTGGVLQICSDVSEGKGLASSSSDIVATLRALAACFDIPLSPADMCAIIREIEP HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC TDGVMFDESVAFFHRRVELGKVMGRLPKICILAIDEGGTIDTVEYNCHRFEFSHEEADQY CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEEECCHHHHHHH AALLADVDAAISRSDVRQIGRAATLSAQMHQKRNPKRTLRQLEALMREVGAHGIVNCHSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCC TFIGLCFDASGPDALDTIARAERTLRDALGQPISRFFTR CEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCC >Mature Secondary Structure SIIENNEDLGVLRFITAGSVDDGKRALIGRLLYDGEAMEAEARRAPPRETRMRAGGAAP CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCCCCCC EPASAPRTHVAPDLDAMAGGPSIAAGGHVGRDGGRTCAKPDRTRAASAHAPPRRLFSIGR CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCC APATFGELVQGREPASGDDFLITLPITLSSTARFCRFRDSDRLYVFPASKKKSLKAAALF CCHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCEEEEEECCCCHHHHHHHHH LERFGILTGGVLQICSDVSEGKGLASSSSDIVATLRALAACFDIPLSPADMCAIIREIEP HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC TDGVMFDESVAFFHRRVELGKVMGRLPKICILAIDEGGTIDTVEYNCHRFEFSHEEADQY CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEEECCHHHHHHH AALLADVDAAISRSDVRQIGRAATLSAQMHQKRNPKRTLRQLEALMREVGAHGIVNCHSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCC TFIGLCFDASGPDALDTIARAERTLRDALGQPISRFFTR CEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA