| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cysD [H]
Identifier: 126452905
GI number: 126452905
Start: 2517783
End: 2518748
Strand: Reverse
Name: cysD [H]
Synonym: BURPS1106A_2563
Alternate gene names: 126452905
Gene position: 2518748-2517783 (Counterclockwise)
Preceding gene: 126453005
Following gene: 126452895
Centisome position: 63.15
GC content: 68.63
Gene sequence:
>966_bases ATGAACGCAACGCTCGAACCATCTTCGCCGGGCGGGGCCGCCGGCGCGTCGACGAGCCGGATGGGCCATCTCGACTGGCT CGAGGCCGAGTCGATCCATATCCTGCGCGAGCTCGTCGCGGAATGCAGCAAGCCGGCGCTGCTGTTCTCGGGCGGCAAGG ATTCGGTGGTCGTGCTGCATCTCGCGCTCAAGGCGTTCGGGCTCGGCGCGAACCGCAGGACGACGCTGCCGTTTCCGCTC GTGCACATCGACACGGGCCACAACTACGACGAGGTGATCGATTTCCGCGACCGCCGCGCAAAGCAGATCGGCGCGGAGCT GGTGGTCGGCCACGTCGAGGATTCGATCGCGCGCGGCACGGTGGTGCTGCGCCGCGAGACGGATTCGCGCAACGCCGCGC AGGCGGTCACGCTGCTCGAGACGATCGAGCGGCACGGCTACACGGCGATGATCGGCGGGGCGCGGCGCGACGAGGAGAAG GCGCGGGCGAAGGAGCGGATTTTCTCGTTTCGCGACGAATTCGGCCAGTGGGACCCGAAGGCGCAGCGCCCGGAGCTGTG GAGCCTGTACAACGCGCGGCTGCACCGGGGCGAACACCTGCGGGTGTTCCCGATCTCGAACTGGACGGAGCTCGACGTGT GGCAGTACATCGCGCGCGAGAAGCTGGAGCTGCCGTCGATCTACTACGCGCACCGCCGGGAGATCGTGCGGCGCAACGGG CTGCTCGTGCCGGTGACGCCGCTCACGCCGATGCGCGAGGGCGAGACGAGCGAGCAGGCGCTGGTGCGGTTCCGCACGGT GGGGGACATTTCGTGCACGTGCCCGGTCGAGAGCGACGCGGACGACGTGGAGAAGATCATCGCGGAGACGGCGGTGACGG AGATCACGGAGCGCGGGGCGACGCGGATGGACGACCAGGCGTCGGAGGCCGCGATGGAGCAGCGCAAGAAGCAGGGCTAT TTCTGA
Upstream 100 bases:
>100_bases TCGCCGCGGGCCCCATCGGCGGGCGGAACCGGCGGGCGGAACCGGCGCCGCCGCATCGCGGCCGTCGCGCCGCAGGGGTT CGGAACGGGGGAGCGGAACC
Downstream 100 bases:
>100_bases CGCACGCGAGGACACATCCATCATGAGCATCATCGAGAACAACGAAGACCTCGGCGTACTGCGGTTCATCACGGCGGGCA GCGTCGACGACGGCAAGCGC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNATLEPSSPGGAAGASTSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPL VHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGYTAMIGGARRDEEK ARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRVFPISNWTELDVWQYIAREKLELPSIYYAHRREIVRRNG LLVPVTPLTPMREGETSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQASEAAMEQRKKQGY F
Sequences:
>Translated_321_residues MNATLEPSSPGGAAGASTSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPL VHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGYTAMIGGARRDEEK ARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRVFPISNWTELDVWQYIAREKLELPSIYYAHRREIVRRNG LLVPVTPLTPMREGETSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQASEAAMEQRKKQGY F >Mature_321_residues MNATLEPSSPGGAAGASTSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPL VHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGYTAMIGGARRDEEK ARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRVFPISNWTELDVWQYIAREKLELPSIYYAHRREIVRRNG LLVPVTPLTPMREGETSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQASEAAMEQRKKQGY F
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=304, Percent_Identity=46.3815789473684, Blast_Score=269, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 36120; Mature: 36120
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATLEPSSPGGAAGASTSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHH LALKAFGLGANRRTTLPFPLVHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEDSIARGT HHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCE VVLRRETDSRNAAQAVTLLETIERHGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPK EEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC AQRPELWSLYNARLHRGEHLRVFPISNWTELDVWQYIAREKLELPSIYYAHRREIVRRNG CCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LLVPVTPLTPMREGETSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGA CEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC TRMDDQASEAAMEQRKKQGYF CCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNATLEPSSPGGAAGASTSRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHH LALKAFGLGANRRTTLPFPLVHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEDSIARGT HHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCE VVLRRETDSRNAAQAVTLLETIERHGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPK EEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC AQRPELWSLYNARLHRGEHLRVFPISNWTELDVWQYIAREKLELPSIYYAHRREIVRRNG CCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LLVPVTPLTPMREGETSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGA CEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC TRMDDQASEAAMEQRKKQGYF CCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]