| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452720
Identifier: 126452720
GI number: 126452720
Start: 817157
End: 817906
Strand: Direct
Name: 126452720
Synonym: BURPS1106A_0835
Alternate gene names: NA
Gene position: 817157-817906 (Clockwise)
Preceding gene: 126454072
Following gene: 126452104
Centisome position: 20.49
GC content: 68.67
Gene sequence:
>750_bases ATGCTCGCACGCCTGTCCGCCACCGACCGTTTCGCCCTCGCGCAGGGTTTCCGCGACTTTTCCCCGACGCTGATGGCGAT CCTGTCGTGGGGGCTCGTCACCGGCATCGCAATGAGCAAATCGGTGCTGACGACGGGGCAGGCGCTCGGCATGTCGATCC TCGTCTACGCGGGCTCGTCGCAACTCGCCGTGCTGCCGCTGTTCGCCGCGAAGCTGCCGGTCTGGACGATTCTCCTGACG GCCGCGATGGTGAACATGCGCTTCGTGATCTTCAGCGCGGGGCTCGCACCCCATTTCTCGTATCTGCCGCTGTGGCGGCG CCTCGCGATCGGTTATTTCAACGGCGACGTGATCTATCTGCTGTTCCAGAAGCAGGGCTTCGCCGCGGGCCACGTGCCCG GCAAGGAGGCGTACTTCTGGGGGATGGCGCTCACGAGCTGGTTCGCGTGGCAGGCTTCGTCGCTCGTCGGCATCGCGCTC GCGAGCGCGTTTCCCGACAGTTGGGGGCTCGCGCTCGCCGGCACGCTCGCGCTGATTCCGATCATGGTCTCGGCGATCTC GAACCGCTCGACGCTCGCGGCCGTCGCGGTGGCGGGGATCGTGTCGCTCGTCGCGTTCGATCTGCCGTACCGGCTCGCGC TGCCGCTCGCGGTGGTCGCGGCGCTCGCGGCGGGCAGCGCCGCCGACTGGTTCGTCGAGCGCGCCGACTGGCTGCGCATC CGCGCGGCGCACACGGAGGACGCCGAATGA
Upstream 100 bases:
>100_bases ACGGCGCTATAATCAACGCGCAATCTGCGTGAAAAAATAACGGACGGCGGCGCGCGACGCGCCCGAGCGTCCGGCTTTTC GCCTTCGCGGCGCCTCCCCG
Downstream 100 bases:
>100_bases GCGACTGGCAGGTCTGGCTCGCGATCGCCGGGATGACGCTCGTCACCGCGATCACGCGCGCGCTCTTCCTCGCGGGCGGC GAGCGCACGGTGCTGCCCGA
Product: AzlC family protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; AzlC-Like; Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like Protein; Inner Membrane Protein; AzlC Protein; Branched Chain Amino Acid Efflux Pump LivE; Inner Membrane Protein YgaZ; AzlC Family; Azaleucine Resistance Protein AzlC; Integral Membrane Protein; Azlc Family Protein; Amino Acid Permease; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSSQLAVLPLFAAKLPVWTILLT AAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIAL ASAFPDSWGLALAGTLALIPIMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI RAAHTEDAE
Sequences:
>Translated_249_residues MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSSQLAVLPLFAAKLPVWTILLT AAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIAL ASAFPDSWGLALAGTLALIPIMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI RAAHTEDAE >Mature_249_residues MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSSQLAVLPLFAAKLPVWTILLT AAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIAL ASAFPDSWGLALAGTLALIPIMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI RAAHTEDAE
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26571; Mature: 26571
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSS CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEEECCC QLAVLPLFAAKLPVWTILLTAAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYL CEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHEEECCCEEEE LFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIALASAFPDSWGLALAGTLALIP EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI HHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE RAAHTEDAE EECCCCCCC >Mature Secondary Structure MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSS CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEEECCC QLAVLPLFAAKLPVWTILLTAAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYL CEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHEEECCCEEEE LFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIALASAFPDSWGLALAGTLALIP EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI HHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE RAAHTEDAE EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA