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The map label for this gene is yfgC [C]

Identifier: 126454072

GI number: 126454072

Start: 810246

End: 812015

Strand: Direct

Name: yfgC [C]

Synonym: BURPS1106A_0827

Alternate gene names: 126454072

Gene position: 810246-812015 (Clockwise)

Preceding gene: 126452780

Following gene: 126452720

Centisome position: 20.31

GC content: 72.54

Gene sequence:

>1770_bases
ATGACGCAAGCTCCATCGAACCATCACGCGGTGGCCGCCAGATCCTTGTCCATGCGCGTCAAATCGTCGTTTGCCGTCCT
GCTGTGCGCGGCGCTCGCCTTGCCGCCCGGCGGCCACGCGCAGTCGCGCGGCGATGCGCCGCCGCTCGAATCCGCGCGCG
CCGCCGGCGCCGAGGACGCCGCGGCGCGCGCGCGCGATGCGCTGTCCACGGTGCCGTCCGGCATCGCGCCCGGCGTGTTC
GGCATGTACGGCGGCGCGCAGAGCCGGCTTGCCGATCCGGCGTCGGGCACGCCCAGTTTGCGCGCGCCGCTTCGCTCGTT
GCAACTGCCCGATCTCGGCGACGGCTCGGGCGGCTCGCTGACGCCGCAAGCGGAGCGCCGGCTCGGCGAGCGCGTGATGC
GCGAGGTGCGGCGCGATCCCGACTATCTCGACGACTGGCTCGTGCGCGACTACCTGAATTCCGTCGCGGCGAAGCTCTCC
GCGGCCGCCGCCGCGCAGTTCATCGGCGGCTACATGCCCGATTTCGAGCTGTTCGCGATGCGCGATCCGCAGATCAACGC
GTTCTCGCTGCCGGGCGGTTTCATCGGCATCAACAGCGGGCTCGTCGCGGCGACGCAGACGGAGTCCGAACTCGCGTCGG
TGATTGGCCACGAGATGGGGCATGTGCTGCAGCGGCACATCGCGCGGATGATCGGCGCGAGCGAGAAGAGCGGCTATGCG
GCGCTCGCGACGATGCTGTTCGGCGTGCTCGCGGGCATTCTCGCGCGCAGCGGCGATCTCGGCAGCGCGATCGCGATGGG
CGGCCAGGCGTTCGCGGTCGACAGCCAGCTCAGGTTCTCGCGCTCGGCCGAGCGCGAGGCGGACCGCGTCGGCTTCCAGT
TGCTCGCGGGCGCCGGCTACGATCCGTACGGCATGCCGGGCTTCTTCGAGCGGCTCGAGCGTGCGTCGGTGGGCGACGCG
GGCGTGCCCGCGTACGCGCGCACGCACCCGCTGACGGGCGAGCGGATCGCCGACATGGACGACCGCGCGCGGCGCGCGCC
GTACCGGCAGCCGCGGCAATCGGCGGAATACGGTTTCGTGCGCGCGCGCCTGCGGATGCTGCAGAACCGCGCGCCGACCG
ATTACGCGAACGAGGCAAGACGAATGCGCGCGGAGCTCGACGATCGCGTCGCGCCGAATGTCGCGGCGAACTGGTATGGG
ATCGCGCTCGGCGAGATGCTGGGCGGCCGCTACGATGACGCGGACCGCGCGCTCGCCGCAGCGCGCGATGCGTTCGCGCG
CACGGCCGCGCGCGAGGGCGAGGCGGCGCGCACTTCGCCGAGCCTCGACGTGCTCGCCGCGGAGATCGCGCGTCGCGCCG
GCCGCGGGGACGACGCGGTGCGGCTCGCCGCCGCCGCGCAGGCGCGCTGGCCGGGTTCGCACGCGGCTATCGCCGCGCAT
TTGCAGGCGCTTCTCGCCGCGCGGCGTTACGGGCAGGCGCAGGCGCTCGCACAAGCGGAGGCGAACGCGGCCCCCCGCCA
GCCCGATTGGTGGAACTATCTCGCGCAGGCGAGCCTCGGCCGGGGCGATGCGCTCACGCAGCGCCGCGCGCTCGCGGAGA
AGTTCGCGCTCGAAGGCGCGTGGCCGTCGGCGATCCGGCAACTGCGCGAGGCGCGCGATCTCAAGTCGGCCGGTTTCTAC
GAGCAATCGATCATCAGCGCGCGGCTGCACGAATTCGAGGCACGCTACAAGGAAGAGCGGGAAGAGGACAAGGACGATCG
GCGCGGTTGA

Upstream 100 bases:

>100_bases
CATGTCGTGCTCCGTGAGAGGGCGCCTATCATAGCAGCGCGGCTCGCCGGCCCGGCGCGCGCGGCAGCGGCGCGCGAGCG
GCGGCCGGCGCGCCGTTACA

Downstream 100 bases:

>100_bases
TTCGCGGCGGCACCGCCGCCGCGTGTAATGGGGCGTGATGGATCGGGGGCGATGAAGCGGAGGGGCGCGAAGCGGGGCGG
CACCGAAGCGCCGCCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTQAPSNHHAVAARSLSMRVKSSFAVLLCAALALPPGGHAQSRGDAPPLESARAAGAEDAAARARDALSTVPSGIAPGVF
GMYGGAQSRLADPASGTPSLRAPLRSLQLPDLGDGSGGSLTPQAERRLGERVMREVRRDPDYLDDWLVRDYLNSVAAKLS
AAAAAQFIGGYMPDFELFAMRDPQINAFSLPGGFIGINSGLVAATQTESELASVIGHEMGHVLQRHIARMIGASEKSGYA
ALATMLFGVLAGILARSGDLGSAIAMGGQAFAVDSQLRFSRSAEREADRVGFQLLAGAGYDPYGMPGFFERLERASVGDA
GVPAYARTHPLTGERIADMDDRARRAPYRQPRQSAEYGFVRARLRMLQNRAPTDYANEARRMRAELDDRVAPNVAANWYG
IALGEMLGGRYDDADRALAAARDAFARTAAREGEAARTSPSLDVLAAEIARRAGRGDDAVRLAAAAQARWPGSHAAIAAH
LQALLAARRYGQAQALAQAEANAAPRQPDWWNYLAQASLGRGDALTQRRALAEKFALEGAWPSAIRQLREARDLKSAGFY
EQSIISARLHEFEARYKEEREEDKDDRRG

Sequences:

>Translated_589_residues
MTQAPSNHHAVAARSLSMRVKSSFAVLLCAALALPPGGHAQSRGDAPPLESARAAGAEDAAARARDALSTVPSGIAPGVF
GMYGGAQSRLADPASGTPSLRAPLRSLQLPDLGDGSGGSLTPQAERRLGERVMREVRRDPDYLDDWLVRDYLNSVAAKLS
AAAAAQFIGGYMPDFELFAMRDPQINAFSLPGGFIGINSGLVAATQTESELASVIGHEMGHVLQRHIARMIGASEKSGYA
ALATMLFGVLAGILARSGDLGSAIAMGGQAFAVDSQLRFSRSAEREADRVGFQLLAGAGYDPYGMPGFFERLERASVGDA
GVPAYARTHPLTGERIADMDDRARRAPYRQPRQSAEYGFVRARLRMLQNRAPTDYANEARRMRAELDDRVAPNVAANWYG
IALGEMLGGRYDDADRALAAARDAFARTAAREGEAARTSPSLDVLAAEIARRAGRGDDAVRLAAAAQARWPGSHAAIAAH
LQALLAARRYGQAQALAQAEANAAPRQPDWWNYLAQASLGRGDALTQRRALAEKFALEGAWPSAIRQLREARDLKSAGFY
EQSIISARLHEFEARYKEEREEDKDDRRG
>Mature_588_residues
TQAPSNHHAVAARSLSMRVKSSFAVLLCAALALPPGGHAQSRGDAPPLESARAAGAEDAAARARDALSTVPSGIAPGVFG
MYGGAQSRLADPASGTPSLRAPLRSLQLPDLGDGSGGSLTPQAERRLGERVMREVRRDPDYLDDWLVRDYLNSVAAKLSA
AAAAQFIGGYMPDFELFAMRDPQINAFSLPGGFIGINSGLVAATQTESELASVIGHEMGHVLQRHIARMIGASEKSGYAA
LATMLFGVLAGILARSGDLGSAIAMGGQAFAVDSQLRFSRSAEREADRVGFQLLAGAGYDPYGMPGFFERLERASVGDAG
VPAYARTHPLTGERIADMDDRARRAPYRQPRQSAEYGFVRARLRMLQNRAPTDYANEARRMRAELDDRVAPNVAANWYGI
ALGEMLGGRYDDADRALAAARDAFARTAAREGEAARTSPSLDVLAAEIARRAGRGDDAVRLAAAAQARWPGSHAAIAAHL
QALLAARRYGQAQALAQAEANAAPRQPDWWNYLAQASLGRGDALTQRRALAEKFALEGAWPSAIRQLREARDLKSAGFYE
QSIISARLHEFEARYKEEREEDKDDRRG

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=313, Percent_Identity=30.3514376996805, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI87082185, Length=184, Percent_Identity=30.9782608695652, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 63165; Mature: 63033

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAPSNHHAVAARSLSMRVKSSFAVLLCAALALPPGGHAQSRGDAPPLESARAAGAEDA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHH
AARARDALSTVPSGIAPGVFGMYGGAQSRLADPASGTPSLRAPLRSLQLPDLGDGSGGSL
HHHHHHHHHHCCCCCCCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
TPQAERRLGERVMREVRRDPDYLDDWLVRDYLNSVAAKLSAAAAAQFIGGYMPDFELFAM
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
RDPQINAFSLPGGFIGINSGLVAATQTESELASVIGHEMGHVLQRHIARMIGASEKSGYA
CCCCCCEEECCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ALATMLFGVLAGILARSGDLGSAIAMGGQAFAVDSQLRFSRSAEREADRVGFQLLAGAGY
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
DPYGMPGFFERLERASVGDAGVPAYARTHPLTGERIADMDDRARRAPYRQPRQSAEYGFV
CCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHCCHHHHHCCCCCCCHHHHHHHHH
RARLRMLQNRAPTDYANEARRMRAELDDRVAPNVAANWYGIALGEMLGGRYDDADRALAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
ARDAFARTAAREGEAARTSPSLDVLAAEIARRAGRGDDAVRLAAAAQARWPGSHAAIAAH
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHH
LQALLAARRYGQAQALAQAEANAAPRQPDWWNYLAQASLGRGDALTQRRALAEKFALEGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
WPSAIRQLREARDLKSAGFYEQSIISARLHEFEARYKEEREEDKDDRRG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure 
TQAPSNHHAVAARSLSMRVKSSFAVLLCAALALPPGGHAQSRGDAPPLESARAAGAEDA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHH
AARARDALSTVPSGIAPGVFGMYGGAQSRLADPASGTPSLRAPLRSLQLPDLGDGSGGSL
HHHHHHHHHHCCCCCCCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
TPQAERRLGERVMREVRRDPDYLDDWLVRDYLNSVAAKLSAAAAAQFIGGYMPDFELFAM
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
RDPQINAFSLPGGFIGINSGLVAATQTESELASVIGHEMGHVLQRHIARMIGASEKSGYA
CCCCCCEEECCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ALATMLFGVLAGILARSGDLGSAIAMGGQAFAVDSQLRFSRSAEREADRVGFQLLAGAGY
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
DPYGMPGFFERLERASVGDAGVPAYARTHPLTGERIADMDDRARRAPYRQPRQSAEYGFV
CCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHCCHHHHHCCCCCCCHHHHHHHHH
RARLRMLQNRAPTDYANEARRMRAELDDRVAPNVAANWYGIALGEMLGGRYDDADRALAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
ARDAFARTAAREGEAARTSPSLDVLAAEIARRAGRGDDAVRLAAAAQARWPGSHAAIAAH
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHH
LQALLAARRYGQAQALAQAEANAAPRQPDWWNYLAQASLGRGDALTQRRALAEKFALEGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
WPSAIRQLREARDLKSAGFYEQSIISARLHEFEARYKEEREEDKDDRRG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]