| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452607
Identifier: 126452607
GI number: 126452607
Start: 357777
End: 358181
Strand: Direct
Name: 126452607
Synonym: BURPS1106A_0394
Alternate gene names: NA
Gene position: 357777-358181 (Clockwise)
Preceding gene: 126451557
Following gene: 126453918
Centisome position: 8.97
GC content: 70.37
Gene sequence:
>405_bases ATGTTCAAGATTCTTCAGTCGCGGCGCGTCGTTACGGCGGCGGCATTTGCGCTCGCCGCCGCGTATTCGGTCGGCGTGCA GGCCGAAACCGTGCAGGCCGTCTCGTCCGTCGCGCCGCTGCACGGCGGCGTCGACGGGCCGTTCTTCCCGAAGGCCGCCT CGGCCGTGCCGGCCTCGGCCTCGGCGACGACGGGCGCGCAGTTGCAGCAGCAGGCGCAAAGCCGGCTTGCCGCGAGCCTC GGCGCGAACGGCGCGCTGCGCAACGGCGCGGCGCTCACGAAGGCGCAGGCGCAAGCGAGCGGCCTCGGCTACGTCGCGCA GCATTTCGACGAAATCGACACCGCGCGCACCGGCAAGGTCACGCTCAAGCAGGTTCAGCAGTTCATCGAGCAGCGGCGTC AGTAA
Upstream 100 bases:
>100_bases AGATCGCGCGGGCCGCCGCGGCCCGCTGAGATTGCGGCGAGCGGGGGCGCGTTAAGCGTGCGCTCCGCTTCGTTGAACCC ACGATATTGCGAGTCCAGTC
Downstream 100 bases:
>100_bases CGGGCGGCGCCCGGCGCGCGCCCGCCGCGCGCGTCGCGCCGGCGGGCGCGCGTGACGCGCGCATCGCGCTCGCCGCGTGC TACGCTCGCCGCACCGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFKILQSRRVVTAAAFALAAAYSVGVQAETVQAVSSVAPLHGGVDGPFFPKAASAVPASASATTGAQLQQQAQSRLAASL GANGALRNGAALTKAQAQASGLGYVAQHFDEIDTARTGKVTLKQVQQFIEQRRQ
Sequences:
>Translated_134_residues MFKILQSRRVVTAAAFALAAAYSVGVQAETVQAVSSVAPLHGGVDGPFFPKAASAVPASASATTGAQLQQQAQSRLAASL GANGALRNGAALTKAQAQASGLGYVAQHFDEIDTARTGKVTLKQVQQFIEQRRQ >Mature_134_residues MFKILQSRRVVTAAAFALAAAYSVGVQAETVQAVSSVAPLHGGVDGPFFPKAASAVPASASATTGAQLQQQAQSRLAASL GANGALRNGAALTKAQAQASGLGYVAQHFDEIDTARTGKVTLKQVQQFIEQRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13796; Mature: 13796
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKILQSRRVVTAAAFALAAAYSVGVQAETVQAVSSVAPLHGGVDGPFFPKAASAVPASA CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCC SATTGAQLQQQAQSRLAASLGANGALRNGAALTKAQAQASGLGYVAQHFDEIDTARTGKV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH TLKQVQQFIEQRRQ HHHHHHHHHHHHCC >Mature Secondary Structure MFKILQSRRVVTAAAFALAAAYSVGVQAETVQAVSSVAPLHGGVDGPFFPKAASAVPASA CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCC SATTGAQLQQQAQSRLAASLGANGALRNGAALTKAQAQASGLGYVAQHFDEIDTARTGKV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH TLKQVQQFIEQRRQ HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA