Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126451557

Identifier: 126451557

GI number: 126451557

Start: 356014

End: 357705

Strand: Direct

Name: 126451557

Synonym: BURPS1106A_0393

Alternate gene names: NA

Gene position: 356014-357705 (Clockwise)

Preceding gene: 126453603

Following gene: 126452607

Centisome position: 8.93

GC content: 68.26

Gene sequence:

>1692_bases
ATGCATGGAGGGTATGGCGGCCTCGCGCGCCCGCGCGGCCGGATGCCGGCGACGGCCGCCGTTGCCGCCGCGTTGCTGCT
CGCGCTCGGCGGGTGCGGCGACGATCTGCAGAGCACCACGACGCCCGCGCAGCTCAATCAACCGTACACGGACACGACCG
CGTATTCGCCGAAGGCGGGCGATGGGCTGCCGGCGTCGCAGGTATCCGAACGCGCCGCGGTGATGAGCCACCAGTGGACG
GCGAACGGCGCGAGCGTCGATTACCTGACGACGACCGGCCACCTGACGGCCACCGATCCGAACGGCAACGCGGAGGCGAC
GATGTCGTACGTCGCGTATACGGCGCCGAGCCGCGACGGCTCGCCGCGGCCCGTCACGTTCTTCTACAACGGGGGGCCGG
GCTCGTCGTCGGTGTGGCTGCGGCTCGGCTCGTTCGCGCCGACGCGGGTCGCGACGCCCGATCCGCTGATGACGAACTGG
CCGAATTTCCCGCTCGTCGACAACCCGGAGAGCCTGATCGCGACCACCGACATGGTGTTCATCGATCCGCCGGGCACGGG
CCTGTCGGAGGCGATCCAGCCGAACACGAACCAGACGTTCTGGGGAGCGGACGCCGACGTGAAGGTGATGCGCGATTTCA
TTCGCCGCTACCTGTCGGTCAACGGCCGCGGCGGCTCGCCGATCTATCTGTACGGCGAATCGTACGGCACGCCGCGCACG
GATATGCTCGCGCTCGCGCTCGAATCGGCGGGCGTGCCGCTCACGGGCATCGTGCTGCAGTCGTCGATCCTGAACTACAT
GGCGGCCGCGGGCGACCAGGCGGTGGGCACCTTTCCGTCGTACGCGCAGGTGGCCGCATACTTCAACCAGGTGTCGCCGT
CGCCGACGAATCTGGGCGCGTATGCGCAGCGCATCGAGAATTTCGTGACCGCGCAGTACGCGCCGATCGTGCATTACGCG
ACGGCTTCGTCGCCGATCTCGCCGGACGCCGGCACGCTCGCCGCGTGGTCGTCGCAAACGGGCATGGCCACCGCGTCGAT
CGGCGCGTACTTCCAGTATTTCTACGATACGGAGCCGTCGCCCGGCCAGACGACGCTCGTGCCCGGCTACACGATCGGCC
GCTACGACGGCCGCGTGTCGCTGCCGAACGGCGACGCGCGCCTCGCGAGCGACGACGATCCGTCCGACATCCTGATCTCG
AAGCCGTTCACGAGCGCGCTCGCGTCGCAGATGCCGAACTACCTCGGCTACACCGCGCCGAACGCGACGTATCAGACGCT
CAATCCCGACATCATCGGCGTGTGGAACTTCAGCCACGCGGGCCAGCCGTATCCGGACACGATCCCGGATCTGCTTGCCG
CGCTGCAACTGAATCCGAAGCTGAAGGTGCTCGCGTCGAACGGCTATCATGATCTCGCGACGCCGTACTTCGAAACGGAG
AAGGAGCTCGCGCGGCTGCAGACGGTGTCCGGCCTCGCGCCGAATCTGCAGGTGACGTTCTACCAGGGCGGCCACATGAT
CTATCTCGACGACGTCGCGAGGCCGCAGATGCAGGCGGATCTCGTCGCGTTCTACCAGAACCGGCCGGTGGCAAACGCGT
TGACGCTCGCGGCGCTGCCGTCGCCGTGGCCCGACGAAAGCCCGGCGAACACGCCGACGGCGAAGATCGCGCGGGCCGCC
GCGGCCCGCTGA

Upstream 100 bases:

>100_bases
CGCCGAAATTGAATAAATCAATTGAGACTGATCGAGGAAGGTATTGCATTGCAATACCTTACGTCTTTGAAATAAATAGA
AAGCGAAAATGAAAAAATCG

Downstream 100 bases:

>100_bases
GATTGCGGCGAGCGGGGGCGCGTTAAGCGTGCGCTCCGCTTCGTTGAACCCACGATATTGCGAGTCCAGTCATGTTCAAG
ATTCTTCAGTCGCGGCGCGT

Product: serine carboxypeptidase family protein

Products: NA

Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAGDGLPASQVSERAAVMSHQWT
ANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDGSPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNW
PNFPLVDNPESLIATTDMVFIDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT
DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGAYAQRIENFVTAQYAPIVHYA
TASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPSPGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILIS
KPFTSALASQMPNYLGYTAPNATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE
KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALPSPWPDESPANTPTAKIARAA
AAR

Sequences:

>Translated_563_residues
MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAGDGLPASQVSERAAVMSHQWT
ANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDGSPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNW
PNFPLVDNPESLIATTDMVFIDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT
DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGAYAQRIENFVTAQYAPIVHYA
TASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPSPGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILIS
KPFTSALASQMPNYLGYTAPNATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE
KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALPSPWPDESPANTPTAKIARAA
AAR
>Mature_563_residues
MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAGDGLPASQVSERAAVMSHQWT
ANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDGSPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNW
PNFPLVDNPESLIATTDMVFIDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT
DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGAYAQRIENFVTAQYAPIVHYA
TASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPSPGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILIS
KPFTSALASQMPNYLGYTAPNATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE
KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALPSPWPDESPANTPTAKIARAA
AAR

Specific function: Unknown

COG id: COG2939

COG function: function code E; Carboxypeptidase C (cathepsin A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59776; Mature: 59776

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCC
DGLPASQVSERAAVMSHQWTANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDG
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEEECCCCCC
SPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNWPNFPLVDNPESLIATTDMVF
CCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEE
IDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT
ECCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCH
DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGA
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
YAQRIENFVTAQYAPIVHYATASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPS
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHEEECCCCC
PGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILISKPFTSALASQMPNYLGYTAP
CCCEEEECCEEEECCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHCCCCCC
NATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE
CCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHCCCCHHHH
KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALP
HHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCHHHEEEEECC
SPWPDESPANTPTAKIARAAAAR
CCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCC
DGLPASQVSERAAVMSHQWTANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDG
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEEECCCCCC
SPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNWPNFPLVDNPESLIATTDMVF
CCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEE
IDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT
ECCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCH
DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGA
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
YAQRIENFVTAQYAPIVHYATASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPS
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHEEECCCCC
PGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILISKPFTSALASQMPNYLGYTAP
CCCEEEECCEEEECCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHCCCCCC
NATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE
CCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHCCCCHHHH
KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALP
HHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCHHHEEEEECC
SPWPDESPANTPTAKIARAAAAR
CCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA