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The map label for this gene is omp85 [H]

Identifier: 126452465

GI number: 126452465

Start: 2436166

End: 2438472

Strand: Reverse

Name: omp85 [H]

Synonym: BURPS1106A_2484

Alternate gene names: 126452465

Gene position: 2438472-2436166 (Counterclockwise)

Preceding gene: 126451617

Following gene: 126453885

Centisome position: 61.14

GC content: 63.94

Gene sequence:

>2307_bases
TTGTTCAAACCTCATCGCTTCGTACCTAAGACGGTTGCTGCCGCGGCGCTCGCCGCGCATGGTCTCGCGGCACACGCAAC
GGCGCCCTTCGTGGTGCAGGACATCAAGATCGAAGGCTTGCAGCGCGTCGAAGCGGGTTCCGTGTTCGCCTACCTGCCGA
TCAAGCAGGGCGATACGTTCACCGACGACAAGGCATCCGAGGCGATTCGCGCGCTGTACGCGACGGGCTTCTTCAACGAC
GTGCGGATCGCGACGCAGGGCGGCGTCGTGATCGTCCAGGTGCAGGAGCGTCCGGCGATCGCGTCGATCGACTTCACCGG
CATCAAGGAATTCGACAAGGACAACCTGAACAAGGCGCTGAAGGCCGTGGGCCTGTCGCAGGGGCGTTACTACGACAAGG
CGCTCGTCGACAAGGCGGAGCAGGAGCTCAAGCGCCAGTACCTGACGCGCGGCTTCTACGCGGCGGAAGTGTCGACGACG
GTCACGCCGGTCGACGCGAACCGCGTGTCGATCCTGTTCGCGGTCGCCGAAGGCCCGAGCGCGAAGATTCGCCAGATCAA
CTTCATCGGCAACAAGGCGTTCAAGACGAGCACGCTGCGCGACGAGATGCAGCTGTCCACGCCGAACTGGTTCTCGTGGT
ACACGAAGAACGACCTGTACTCGAAGGAAAAGCTGACGGGCGACCTCGAGAACGTGCGCTCGTACTACCTGAACCGCGGG
TACCTGGAGTTCAACATCGAGTCGACGCAGGTGTCGATCTCGCCGGACAAGAAGGACATGTACCTGACGGTGGCGCTGCA
CGAAGGCGAGCCGTACACGGTATCGAGCGTGAAGCTCGCCGGCAATCTGCTGGATCGCCAGGCCGAGCTCGAGAAGCTCG
TCAAGATCAAGCCGGGCGACCGCTTCTCGGCCGAGAAGCTGCAGCAGACGACGAAGGCGATCGTCGACAAGCTCGGCCAG
TACGGCTACGCGTTCGCGACGGTGAACGCGCAGCCGGAAATCGATCAGGCGACGCACAAGGTGGGCCTCACGCTCGTCGT
CGATCCGAGCCGGCGCGTGTACGTGCGGCGGATCAACATCGTCGGCAACACGCGCACGCGTGACGAGGTGGTGCGTCGCG
AGATGCGCCAGCTCGAGAGCTCGTGGTTCGATTCGAGCCGTCTCGCGCTGTCCAAGGACCGCGTGAACCGTCTCGGCTAC
TTCACCGACGTCGACGTGACGACGGTGCCCGTCGAGGGCACGAACGACCAGGTCGACGTGAACGTGAAGGTCGCCGAAAA
GCCGACGGGCGCGATCACGCTCGGCGCGGGCTTCTCGTCGACGGACAAGGTCGTGCTGTCGGCCGGCATCTCGCAGGACA
ACGTGTTCGGCTCCGGCACGAGCCTCGCGGTGAACGTGAACACCGCGAAGAGCTACCGCACGCTGACCGTCACGCAGGTC
GACCCGTACTTCACCGTCGACGGCATCAAGCGGATCACCGACGTGTTCTACCGCACGTATCAGCCGCTCTATTACTCGAC
GAACTCGAGCTTCCGGATCATCACGGCGGGCGGCAACCTGAAGTTCGGCATTCCGTTCTCGGAAACCGACACGGTCTATT
TCGGCGCGGGCTTCGAGCAGAACCGCCTCGACGTCGATTCGAACACGCCGCAGTCGTATCAGGATTACGTGAACGAGTTC
GGCCGCGTGTCGAACACGGTGCCGCTCACGATCGGCTGGTCGCGCGACGCGCGCGACAGCGCGCTGATCCCGAGCCGCGG
CTACTTCACGCAGGCGAACGCCGAATACGGCGTGCCGGTGGGCAAGATCCAGTACTACAAGATGGACGTGCAGGGCCAGT
ACTACTACTCGTTCGCGCGCGGCTTCATCCTCGGCCTGAACTTCCAGGCGGGCTACGGCAACGGCATCGGCAATCCGTAC
CCGATCTTCAAGAATTACTACGCGGGCGGTATCGGCTCCGTGCGCGGCTACGAGCCGAGCTCGCTCGGCCCGCGCGACAC
GAAGACGAACGATCCGATCGGCGGCTCGAAGATGGTCGTCGGCAACATCGAGCTGACGTTCCCGCTGCCGGGCACGGGCT
ACGACCGCACGCTGCGCGTGTTCACGTTCCTCGACGGCGGCAACGTGTGGGGCAATGCGCCGGGCGGCACGAGCACGGGC
GCGAACGGTCTGCGCTACGGCTACGGTATCGGCCTCGCGTGGATCTCGCCGATCGGGCCGCTCAAGCTGAGCTTGGGCTT
CCCGCTGCAGAAGCACGAAGGCGATCAGTATCAGAAATTCCAGTTCCAGATCGGGACGGCGTTCTGA

Upstream 100 bases:

>100_bases
TTCAACGATCTGGCTCGGTTAATCCATTTTTGACGCGTCGGGCGGCAGCCGTAACGGTGGCCGCCTGATCTGATGCAAGC
TTAAACACTGGGGATGCATG

Downstream 100 bases:

>100_bases
TCGATCAGGCACTGACTACAGCATCGAGAGGGTAATCTTGCTAACCGGTAAGTTTTCGAAACGAGTGATGTGCGCGCTGG
CGCTCGCGGCCGCGCTCGGC

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MFKPHRFVPKTVAAAALAAHGLAAHATAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFND
VRIATQGGVVIVQVQERPAIASIDFTGIKEFDKDNLNKALKAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVSTT
VTPVDANRVSILFAVAEGPSAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
YLEFNIESTQVSISPDKKDMYLTVALHEGEPYTVSSVKLAGNLLDRQAELEKLVKIKPGDRFSAEKLQQTTKAIVDKLGQ
YGYAFATVNAQPEIDQATHKVGLTLVVDPSRRVYVRRINIVGNTRTRDEVVRREMRQLESSWFDSSRLALSKDRVNRLGY
FTDVDVTTVPVEGTNDQVDVNVKVAEKPTGAITLGAGFSSTDKVVLSAGISQDNVFGSGTSLAVNVNTAKSYRTLTVTQV
DPYFTVDGIKRITDVFYRTYQPLYYSTNSSFRIITAGGNLKFGIPFSETDTVYFGAGFEQNRLDVDSNTPQSYQDYVNEF
GRVSNTVPLTIGWSRDARDSALIPSRGYFTQANAEYGVPVGKIQYYKMDVQGQYYYSFARGFILGLNFQAGYGNGIGNPY
PIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMVVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTSTG
ANGLRYGYGIGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF

Sequences:

>Translated_768_residues
MFKPHRFVPKTVAAAALAAHGLAAHATAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFND
VRIATQGGVVIVQVQERPAIASIDFTGIKEFDKDNLNKALKAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVSTT
VTPVDANRVSILFAVAEGPSAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
YLEFNIESTQVSISPDKKDMYLTVALHEGEPYTVSSVKLAGNLLDRQAELEKLVKIKPGDRFSAEKLQQTTKAIVDKLGQ
YGYAFATVNAQPEIDQATHKVGLTLVVDPSRRVYVRRINIVGNTRTRDEVVRREMRQLESSWFDSSRLALSKDRVNRLGY
FTDVDVTTVPVEGTNDQVDVNVKVAEKPTGAITLGAGFSSTDKVVLSAGISQDNVFGSGTSLAVNVNTAKSYRTLTVTQV
DPYFTVDGIKRITDVFYRTYQPLYYSTNSSFRIITAGGNLKFGIPFSETDTVYFGAGFEQNRLDVDSNTPQSYQDYVNEF
GRVSNTVPLTIGWSRDARDSALIPSRGYFTQANAEYGVPVGKIQYYKMDVQGQYYYSFARGFILGLNFQAGYGNGIGNPY
PIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMVVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTSTG
ANGLRYGYGIGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
>Mature_768_residues
MFKPHRFVPKTVAAAALAAHGLAAHATAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTFTDDKASEAIRALYATGFFND
VRIATQGGVVIVQVQERPAIASIDFTGIKEFDKDNLNKALKAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVSTT
VTPVDANRVSILFAVAEGPSAKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
YLEFNIESTQVSISPDKKDMYLTVALHEGEPYTVSSVKLAGNLLDRQAELEKLVKIKPGDRFSAEKLQQTTKAIVDKLGQ
YGYAFATVNAQPEIDQATHKVGLTLVVDPSRRVYVRRINIVGNTRTRDEVVRREMRQLESSWFDSSRLALSKDRVNRLGY
FTDVDVTTVPVEGTNDQVDVNVKVAEKPTGAITLGAGFSSTDKVVLSAGISQDNVFGSGTSLAVNVNTAKSYRTLTVTQV
DPYFTVDGIKRITDVFYRTYQPLYYSTNSSFRIITAGGNLKFGIPFSETDTVYFGAGFEQNRLDVDSNTPQSYQDYVNEF
GRVSNTVPLTIGWSRDARDSALIPSRGYFTQANAEYGVPVGKIQYYKMDVQGQYYYSFARGFILGLNFQAGYGNGIGNPY
PIFKNYYAGGIGSVRGYEPSSLGPRDTKTNDPIGGSKMVVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTSTG
ANGLRYGYGIGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=481, Percent_Identity=23.2848232848233, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1786374, Length=821, Percent_Identity=36.2971985383678, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 84794; Mature: 84794

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHRFVPKTVAAAALAAHGLAAHATAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTF
CCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEEEEEECCCEEECCCCEEEEEEECCCCCC
TDDKASEAIRALYATGFFNDVRIATQGGVVIVQVQERPAIASIDFTGIKEFDKDNLNKAL
CCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
KAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVSTTVTPVDANRVSILFAVAEGPS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCC
AKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
CEEEEEEEECCCCEECHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHCCC
YLEFNIESTQVSISPDKKDMYLTVALHEGEPYTVSSVKLAGNLLDRQAELEKLVKIKPGD
EEEEEEECEEEEECCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHEEECCCC
RFSAEKLQQTTKAIVDKLGQYGYAFATVNAQPEIDQATHKVGLTLVVDPSRRVYVRRINI
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCEEEEECCCCEEEEEEEEE
VGNTRTRDEVVRREMRQLESSWFDSSRLALSKDRVNRLGYFTDVDVTTVPVEGTNDQVDV
ECCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCEEECCEEEEEECCCCCEEEE
NVKVAEKPTGAITLGAGFSSTDKVVLSAGISQDNVFGSGTSLAVNVNTAKSYRTLTVTQV
EEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEEECCCCEEEEEEEEE
DPYFTVDGIKRITDVFYRTYQPLYYSTNSSFRIITAGGNLKFGIPFSETDTVYFGAGFEQ
CCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCCCCCCEEEEECCCCC
NRLDVDSNTPQSYQDYVNEFGRVSNTVPLTIGWSRDARDSALIPSRGYFTQANAEYGVPV
CCEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
GKIQYYKMDVQGQYYYSFARGFILGLNFQAGYGNGIGNPYPIFKNYYAGGIGSVRGYEPS
CEEEEEEEECCCEEEEEEECEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
SLGPRDTKTNDPIGGSKMVVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTSTG
CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCCCCCCCCC
ANGLRYGYGIGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
CCCCEEEEEECCCEECCCCCEEEEECCCHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MFKPHRFVPKTVAAAALAAHGLAAHATAPFVVQDIKIEGLQRVEAGSVFAYLPIKQGDTF
CCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEEEEEECCCEEECCCCEEEEEEECCCCCC
TDDKASEAIRALYATGFFNDVRIATQGGVVIVQVQERPAIASIDFTGIKEFDKDNLNKAL
CCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
KAVGLSQGRYYDKALVDKAEQELKRQYLTRGFYAAEVSTTVTPVDANRVSILFAVAEGPS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCC
AKIRQINFIGNKAFKTSTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRG
CEEEEEEEECCCCEECHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHCCC
YLEFNIESTQVSISPDKKDMYLTVALHEGEPYTVSSVKLAGNLLDRQAELEKLVKIKPGD
EEEEEEECEEEEECCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHEEECCCC
RFSAEKLQQTTKAIVDKLGQYGYAFATVNAQPEIDQATHKVGLTLVVDPSRRVYVRRINI
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCEEEEECCCCEEEEEEEEE
VGNTRTRDEVVRREMRQLESSWFDSSRLALSKDRVNRLGYFTDVDVTTVPVEGTNDQVDV
ECCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCEEECCEEEEEECCCCCEEEE
NVKVAEKPTGAITLGAGFSSTDKVVLSAGISQDNVFGSGTSLAVNVNTAKSYRTLTVTQV
EEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEECCCCEEEEEEECCCCEEEEEEEEE
DPYFTVDGIKRITDVFYRTYQPLYYSTNSSFRIITAGGNLKFGIPFSETDTVYFGAGFEQ
CCEEEHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEECCCCCCCCEEEEECCCCC
NRLDVDSNTPQSYQDYVNEFGRVSNTVPLTIGWSRDARDSALIPSRGYFTQANAEYGVPV
CCEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
GKIQYYKMDVQGQYYYSFARGFILGLNFQAGYGNGIGNPYPIFKNYYAGGIGSVRGYEPS
CEEEEEEEECCCEEEEEEECEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
SLGPRDTKTNDPIGGSKMVVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGNAPGGTSTG
CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCCCCCCCCC
ANGLRYGYGIGLAWISPIGPLKLSLGFPLQKHEGDQYQKFQFQIGTAF
CCCCEEEEEECCCEECCCCCEEEEECCCHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]