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The map label for this gene is osmF [H]

Identifier: 126452444

GI number: 126452444

Start: 1958330

End: 1959268

Strand: Reverse

Name: osmF [H]

Synonym: BURPS1106A_1995

Alternate gene names: 126452444

Gene position: 1959268-1958330 (Counterclockwise)

Preceding gene: 126454631

Following gene: 126455455

Centisome position: 49.12

GC content: 67.94

Gene sequence:

>939_bases
ATGAAAGTTCCCCGTTTCAGCCGTACCCTGCGCGCGGCCGCCGCCGCGCTCGCCGTTTCCCTCTGCGCGGCCGCGCCCGG
CGCGCGCGCCGCCGGCGCGGTCACCGTCGCGTCGAAGATCGATACCGAAGGCAACCTGCTCGGCAACGTGATCTCGCAGG
TGCTCAAGGCCCACGGAATCGCCGTCGTCGACAAGATCGGGCTCGGCGCGACGCCGATCGTCCGCCGGGCGCTGACGACA
GGCGAAATCGACATCTACCCGGAATACACGGGCAACGCCGCGTTCTTCTTCAACAAGGCCGACGATCCCGCGTGGAAGAA
CGCCGCGCAAGGCTACGCGCTCGCCAGGCAGCTCGATTACGCGGCAAACCGGATCGTCTGGCTCGCGCCCGCGCCCGCGA
ACAACACATGGGGTGTCGCGGTGCTCAACTCGATCGCGCAGGCGCGGCATCTGAAGACGTTCAGCGATTTCGGCAAGTGG
GTCGCCGCGGGCGGCAAGGTGAAGCTCGCCGCGTCGGCCGAGTTCGTCAACAGCGCATCCGCGCTGCCGTCGTTCGAGAA
GGCGTACGGCTTCAAACTGAAGCCGGAGCAGATGCTCGTGCTGTCGGGCGGCGACACCGCGGCGACGATCAAGGCCGCCG
CGCAGCAGACGGACGGCGTGAACGCCGCGATGGTCTATGGCACCGACGGCGGCATCGCGGCCACCGGGCTCGCGGTGCTC
GACGACGACAAGCACGTGCAGCCCGTCTACGCGCCCACGCCGATCATCCGCGAGGCGGTGCTCAACGCGCATCCGCAGAT
CGCCGACTACCTGAAGCCCGTGTTCGCGAGCCTCGACCTGAAGACGCTGCAAGCGCTCAACGCGCGAATCCAGATCAACG
GCGAGCCGGCCGCGGGCGTCGCGGCGAGCTATCTGAAAGCGAAGGGCTTCGTCAAATGA

Upstream 100 bases:

>100_bases
GCGCGCGGCCCCGCTTCACGCCCGGCCGCGTCGCGCCGCCGGTGCGCGCGGGCGCCTCTCGCATCCGTTCATCCGCTGTC
CGACAGGAGCATCAGCCCCG

Downstream 100 bases:

>100_bases
CGCCGCGCACGGCGGGCGGCGCGGCCGCGCCCGCTCCCGCGCCGCGCCCGCGCGCGATGCCCGCGTGGGCCGCGCGCGTC
GACAAGGTCGGCGTGCTGAT

Product: amine ABC transporter, periplasmic amine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKVPRFSRTLRAAAAALAVSLCAAAPGARAAGAVTVASKIDTEGNLLGNVISQVLKAHGIAVVDKIGLGATPIVRRALTT
GEIDIYPEYTGNAAFFFNKADDPAWKNAAQGYALARQLDYAANRIVWLAPAPANNTWGVAVLNSIAQARHLKTFSDFGKW
VAAGGKVKLAASAEFVNSASALPSFEKAYGFKLKPEQMLVLSGGDTAATIKAAAQQTDGVNAAMVYGTDGGIAATGLAVL
DDDKHVQPVYAPTPIIREAVLNAHPQIADYLKPVFASLDLKTLQALNARIQINGEPAAGVAASYLKAKGFVK

Sequences:

>Translated_312_residues
MKVPRFSRTLRAAAAALAVSLCAAAPGARAAGAVTVASKIDTEGNLLGNVISQVLKAHGIAVVDKIGLGATPIVRRALTT
GEIDIYPEYTGNAAFFFNKADDPAWKNAAQGYALARQLDYAANRIVWLAPAPANNTWGVAVLNSIAQARHLKTFSDFGKW
VAAGGKVKLAASAEFVNSASALPSFEKAYGFKLKPEQMLVLSGGDTAATIKAAAQQTDGVNAAMVYGTDGGIAATGLAVL
DDDKHVQPVYAPTPIIREAVLNAHPQIADYLKPVFASLDLKTLQALNARIQINGEPAAGVAASYLKAKGFVK
>Mature_312_residues
MKVPRFSRTLRAAAAALAVSLCAAAPGARAAGAVTVASKIDTEGNLLGNVISQVLKAHGIAVVDKIGLGATPIVRRALTT
GEIDIYPEYTGNAAFFFNKADDPAWKNAAQGYALARQLDYAANRIVWLAPAPANNTWGVAVLNSIAQARHLKTFSDFGKW
VAAGGKVKLAASAEFVNSASALPSFEKAYGFKLKPEQMLVLSGGDTAATIKAAAQQTDGVNAAMVYGTDGGIAATGLAVL
DDDKHVQPVYAPTPIIREAVLNAHPQIADYLKPVFASLDLKTLQALNARIQINGEPAAGVAASYLKAKGFVK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=294, Percent_Identity=59.1836734693878, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32469; Mature: 32469

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVPRFSRTLRAAAAALAVSLCAAAPGARAAGAVTVASKIDTEGNLLGNVISQVLKAHGI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCE
AVVDKIGLGATPIVRRALTTGEIDIYPEYTGNAAFFFNKADDPAWKNAAQGYALARQLDY
EEEEECCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AANRIVWLAPAPANNTWGVAVLNSIAQARHLKTFSDFGKWVAAGGKVKLAASAEFVNSAS
HHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
ALPSFEKAYGFKLKPEQMLVLSGGDTAATIKAAAQQTDGVNAAMVYGTDGGIAATGLAVL
CCCCHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEE
DDDKHVQPVYAPTPIIREAVLNAHPQIADYLKPVFASLDLKTLQALNARIQINGEPAAGV
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCHHH
AASYLKAKGFVK
HHHHHHHCCCCC
>Mature Secondary Structure
MKVPRFSRTLRAAAAALAVSLCAAAPGARAAGAVTVASKIDTEGNLLGNVISQVLKAHGI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCE
AVVDKIGLGATPIVRRALTTGEIDIYPEYTGNAAFFFNKADDPAWKNAAQGYALARQLDY
EEEEECCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AANRIVWLAPAPANNTWGVAVLNSIAQARHLKTFSDFGKWVAAGGKVKLAASAEFVNSAS
HHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
ALPSFEKAYGFKLKPEQMLVLSGGDTAATIKAAAQQTDGVNAAMVYGTDGGIAATGLAVL
CCCCHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEE
DDDKHVQPVYAPTPIIREAVLNAHPQIADYLKPVFASLDLKTLQALNARIQINGEPAAGV
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCHHH
AASYLKAKGFVK
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]