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The map label for this gene is yacF [C]

Identifier: 126452426

GI number: 126452426

Start: 3438020

End: 3438775

Strand: Direct

Name: yacF [C]

Synonym: BURPS1106A_3535

Alternate gene names: 126452426

Gene position: 3438020-3438775 (Clockwise)

Preceding gene: 126453294

Following gene: 126451790

Centisome position: 86.2

GC content: 62.83

Gene sequence:

>756_bases
TTGATTCTTTACGAGTATCCGTTCAACGAGCGAATCCGCACGCTGTTGCGTCTCGAAGATTTGTTCGAACGCTTCACGTT
CTTCGTGGCTCAAGAGGACGCGAGAGAGCATCATGTCGCGCTGACGACGCTGTTCGAGATCTCCGAAGTCGCGGGCCGCG
CAGATCTGAAATCGGATCTGATGAAAGAGCTTGAGCGCCAGCGCCAGACACTCGCGCCGTTTCGCGGCAACCCCGGCATC
GAGCAGAACGCGCTCGAGGCGGTGCTCGGCGAAATCGAGCAGACGCTCGCGAACCTCGCGCAAATGCAAGGCAAGACCGG
TCAGCATCTGATCGACAACGAGTGGCTCGCGAGCATCCGCAGCCGCGCCGTCATTCCCGGCGGCACGTGCAAGTTCGATC
TCCCGTCGTACTACGCATGGCAGCAGTGGCCGGCCGAACAGCGCCGCCACGACATCGCGAAGTGGGCGATGCCGCTCCTG
CCGCTGCGCGACGCGGCGATGATCGTGCTGCGCCTCGCGCGAGAATCCGGGCAAGCATCGAAGGTGATGGCGATGCAGGG
CAGCTATCAGCAGATGCTGTCCGGCCGCACGTACCAGTTGATGCAGGTGCGCGTGCCGCCCGAGTTGCGCGTGATTCCCG
AAGCGAGCGCGAACAAGTACATGCTTTGGGTGCGCTTCACCGCGCAGGACGGCGACGTGCGGCCGCGTGCGGTCGACATC
GACGTGCCGTTCCAGCTCACGCTCTGCAATCTGTAA

Upstream 100 bases:

>100_bases
CATCGTCAGCGCCGAAAAATGGCGCGATTGCTAGGGTAGACCGTGGGCATTAGAATGTCCGTGCAATTTTGGTCATTCCC
AACGCGAGAGGCGAGCGCGC

Downstream 100 bases:

>100_bases
CGGCGGCCTTGCGCCGCATCGATCGATCCATTCGTATGGTTACCGTCGTGAAATGCCCGTCCTGCGGCAAGGAAGTGCGC
TGGACGCCCGAAAACCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MILYEYPFNERIRTLLRLEDLFERFTFFVAQEDAREHHVALTTLFEISEVAGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEIEQTLANLAQMQGKTGQHLIDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRHDIAKWAMPLL
PLRDAAMIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVPPELRVIPEASANKYMLWVRFTAQDGDVRPRAVDI
DVPFQLTLCNL

Sequences:

>Translated_251_residues
MILYEYPFNERIRTLLRLEDLFERFTFFVAQEDAREHHVALTTLFEISEVAGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEIEQTLANLAQMQGKTGQHLIDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRHDIAKWAMPLL
PLRDAAMIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVPPELRVIPEASANKYMLWVRFTAQDGDVRPRAVDI
DVPFQLTLCNL
>Mature_251_residues
MILYEYPFNERIRTLLRLEDLFERFTFFVAQEDAREHHVALTTLFEISEVAGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEIEQTLANLAQMQGKTGQHLIDNEWLASIRSRAVIPGGTCKFDLPSYYAWQQWPAEQRRHDIAKWAMPLL
PLRDAAMIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVPPELRVIPEASANKYMLWVRFTAQDGDVRPRAVDI
DVPFQLTLCNL

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=254, Percent_Identity=31.8897637795276, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28879; Mature: 28879

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYEYPFNERIRTLLRLEDLFERFTFFVAQEDAREHHVALTTLFEISEVAGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MKELERQRQTLAPFRGNPGIEQNALEAVLGEIEQTLANLAQMQGKTGQHLIDNEWLASIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SRAVIPGGTCKFDLPSYYAWQQWPAEQRRHDIAKWAMPLLPLRDAAMIVLRLARESGQAS
HCCCCCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
KVMAMQGSYQQMLSGRTYQLMQVRVPPELRVIPEASANKYMLWVRFTAQDGDVRPRAVDI
HHHHHCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCEEEEEEEEECCCCCCCCEEEEE
DVPFQLTLCNL
CCCEEEEEECC
>Mature Secondary Structure
MILYEYPFNERIRTLLRLEDLFERFTFFVAQEDAREHHVALTTLFEISEVAGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MKELERQRQTLAPFRGNPGIEQNALEAVLGEIEQTLANLAQMQGKTGQHLIDNEWLASIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SRAVIPGGTCKFDLPSYYAWQQWPAEQRRHDIAKWAMPLLPLRDAAMIVLRLARESGQAS
HCCCCCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
KVMAMQGSYQQMLSGRTYQLMQVRVPPELRVIPEASANKYMLWVRFTAQDGDVRPRAVDI
HHHHHCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCEEEEEEEEECCCCCCCCEEEEE
DVPFQLTLCNL
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA