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The map label for this gene is lolA [H]

Identifier: 126452390

GI number: 126452390

Start: 2971194

End: 2971910

Strand: Reverse

Name: lolA [H]

Synonym: BURPS1106A_3041

Alternate gene names: 126452390

Gene position: 2971910-2971194 (Counterclockwise)

Preceding gene: 126452613

Following gene: 126454407

Centisome position: 74.51

GC content: 66.67

Gene sequence:

>717_bases
ATGCAGCATCAGTCGTTGGCAGTTCATACCGGCTCCGGCTCCGGCTTCGCGCCGAAGCACGGGTTTGCGCGCGCGCTGCG
CGCCGCGCTCGCGGGCGCGGCGTGCGCGCTCGTCGCATCGCACGCATTCGCGAGCGGCACCGAGCAACTGAAGGCGTTCG
TCGCGAAGGTGCACGCGGCGAAGGGCGAGTTCACCCAGCAGATCGTCAAGGCGCCGCCGAAGGCGGCGAGCGGCGCGGTG
CCGACCGTCAAGCCCACCGACAACTCGAGCGGCAGCTTCGTGTTCTCGCGGCCGGGCAAGTTCATCTGGACGTATCAGAA
GCCGTACCAGCAGGTACTGCAGGCCGACGGCGACAAGCTCTACGTGTACGACAAGGATCTGAACCAGGTCACCGAGCGCA
AGCTCGCGGGCGCGCTCGGCGCGAGCCCCGCCGCGATCCTGTTCGGCAGCAACGATCTCGACAAGAACTACACGCTGCGC
GACGCGGGCGAGAAGGGCGGGATCGACTGGCTCGAAATGGTGCCGAAGGCGCAGGACACGCAGTTCCAGCGGATCGGCAT
CGGCTTCCGGAACGGCATGCTCGCCGCGATGGAGCTGCACGACGTGTTCGGCAACGTGACGCTGCTCACGTTCACGAACA
TTCAGACGAATCCGCCGCTCAAGGCCGATCAGTTCAAGTTCGTCGTGCCGAAGGGCGCCGACGTCGTCACCGGCTGA

Upstream 100 bases:

>100_bases
CGGGAACCGCGAAATCCTCACCCCCGCGCGCGACGCGGAGTGAATCCGCGCCGGCGCGCCTGCCGAACGCGCGCCGGCCC
TCTACGGAGAAAACCACAGC

Downstream 100 bases:

>100_bases
GCGGCCGGCTGCCTCGGCCGACGAACGGGCCCGCCAGCGATGGCGGGCCCGTTCGTTTCGGCGCGCCGCTTCGCGGCCCC
GCGCCGCCGCCGCGCCGCCG

Product: outer-membrane lipoprotein carrier protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQHQSLAVHTGSGSGFAPKHGFARALRAALAGAACALVASHAFASGTEQLKAFVAKVHAAKGEFTQQIVKAPPKAASGAV
PTVKPTDNSSGSFVFSRPGKFIWTYQKPYQQVLQADGDKLYVYDKDLNQVTERKLAGALGASPAAILFGSNDLDKNYTLR
DAGEKGGIDWLEMVPKAQDTQFQRIGIGFRNGMLAAMELHDVFGNVTLLTFTNIQTNPPLKADQFKFVVPKGADVVTG

Sequences:

>Translated_238_residues
MQHQSLAVHTGSGSGFAPKHGFARALRAALAGAACALVASHAFASGTEQLKAFVAKVHAAKGEFTQQIVKAPPKAASGAV
PTVKPTDNSSGSFVFSRPGKFIWTYQKPYQQVLQADGDKLYVYDKDLNQVTERKLAGALGASPAAILFGSNDLDKNYTLR
DAGEKGGIDWLEMVPKAQDTQFQRIGIGFRNGMLAAMELHDVFGNVTLLTFTNIQTNPPLKADQFKFVVPKGADVVTG
>Mature_238_residues
MQHQSLAVHTGSGSGFAPKHGFARALRAALAGAACALVASHAFASGTEQLKAFVAKVHAAKGEFTQQIVKAPPKAASGAV
PTVKPTDNSSGSFVFSRPGKFIWTYQKPYQQVLQADGDKLYVYDKDLNQVTERKLAGALGASPAAILFGSNDLDKNYTLR
DAGEKGGIDWLEMVPKAQDTQFQRIGIGFRNGMLAAMELHDVFGNVTLLTFTNIQTNPPLKADQFKFVVPKGADVVTG

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 25381; Mature: 25381

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHQSLAVHTGSGSGFAPKHGFARALRAALAGAACALVASHAFASGTEQLKAFVAKVHAA
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KGEFTQQIVKAPPKAASGAVPTVKPTDNSSGSFVFSRPGKFIWTYQKPYQQVLQADGDKL
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCEE
YVYDKDLNQVTERKLAGALGASPAAILFGSNDLDKNYTLRDAGEKGGIDWLEMVPKAQDT
EEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHCCCCCCC
QFQRIGIGFRNGMLAAMELHDVFGNVTLLTFTNIQTNPPLKADQFKFVVPKGADVVTG
CCCEECCCCCCCEEHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MQHQSLAVHTGSGSGFAPKHGFARALRAALAGAACALVASHAFASGTEQLKAFVAKVHAA
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KGEFTQQIVKAPPKAASGAVPTVKPTDNSSGSFVFSRPGKFIWTYQKPYQQVLQADGDKL
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCEE
YVYDKDLNQVTERKLAGALGASPAAILFGSNDLDKNYTLRDAGEKGGIDWLEMVPKAQDT
EEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHCCCCCCC
QFQRIGIGFRNGMLAAMELHDVFGNVTLLTFTNIQTNPPLKADQFKFVVPKGADVVTG
CCCEECCCCCCCEEHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA