| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452360
Identifier: 126452360
GI number: 126452360
Start: 1131421
End: 1131876
Strand: Direct
Name: 126452360
Synonym: BURPS1106A_1151
Alternate gene names: NA
Gene position: 1131421-1131876 (Clockwise)
Preceding gene: 126451884
Following gene: 126453000
Centisome position: 28.37
GC content: 67.11
Gene sequence:
>456_bases ATGCACATGCAAATGACCGAACGCGTGCCGGCGAAGACGCTGACCGAGCGCTTCGTGCACGCGCTCACGTTCGAGGTGAC CGCGATCGCGATCTGCGCGCCGATCGTCAGTTGGGTGCTCGGCCTGTCGCTCGTGCACGTGGGGGCGCTGACGGCGGCGG TGTCGGTGATCGCGATGGTGTGGAACGTCACGTTCAATGCGCTGTTCGAGCGGATCGAGCGCCGTTACCGGCTGACGCGC ACGCTCGCGGTGCGCGCGGCGCATGCGATCGCGTTCGAGCTCGGCCTCGTCGCGATGGCGCTGCCGCTCGCCGCGTGGTG GCTGGAGATCAGCCTGCTCGAGGCGCTGCTGCTCGACTTCGGCATCCTGCTGTTCTTCCTGCCGTACACGTTCCTGTTCA ACCTCGGCTACGACCGGTTGCGTGCGCGCTGGATCGCGCAAAGGGCGATGGCCTGA
Upstream 100 bases:
>100_bases ATGCTCCTTTGATGTATCGGAAAAACCGATCATAACAAACTGGATGGCTACGGTTAATCCGATGAAAATGGCTCCGTCTC GTTAATTGATGGAGCTTGAG
Downstream 100 bases:
>100_bases CGATGATCGGAATCCGAATCTTCTTCGATGGTCCCTTTCGAAAGCCGGCGCGATGCCGGCTTTTGTTTTGGGTACGGCCG GTCAAGGCACGGCCGCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Outer Membrane Protein; Transmembrane Pair Family Protein
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MHMQMTERVPAKTLTERFVHALTFEVTAIAICAPIVSWVLGLSLVHVGALTAAVSVIAMVWNVTFNALFERIERRYRLTR TLAVRAAHAIAFELGLVAMALPLAAWWLEISLLEALLLDFGILLFFLPYTFLFNLGYDRLRARWIAQRAMA
Sequences:
>Translated_151_residues MHMQMTERVPAKTLTERFVHALTFEVTAIAICAPIVSWVLGLSLVHVGALTAAVSVIAMVWNVTFNALFERIERRYRLTR TLAVRAAHAIAFELGLVAMALPLAAWWLEISLLEALLLDFGILLFFLPYTFLFNLGYDRLRARWIAQRAMA >Mature_151_residues MHMQMTERVPAKTLTERFVHALTFEVTAIAICAPIVSWVLGLSLVHVGALTAAVSVIAMVWNVTFNALFERIERRYRLTR TLAVRAAHAIAFELGLVAMALPLAAWWLEISLLEALLLDFGILLFFLPYTFLFNLGYDRLRARWIAQRAMA
Specific function: Unknown
COG id: COG4125
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17089; Mature: 17089
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMQMTERVPAKTLTERFVHALTFEVTAIAICAPIVSWVLGLSLVHVGALTAAVSVIAMV CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNVTFNALFERIERRYRLTRTLAVRAAHAIAFELGLVAMALPLAAWWLEISLLEALLLDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILLFFLPYTFLFNLGYDRLRARWIAQRAMA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MHMQMTERVPAKTLTERFVHALTFEVTAIAICAPIVSWVLGLSLVHVGALTAAVSVIAMV CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNVTFNALFERIERRYRLTRTLAVRAAHAIAFELGLVAMALPLAAWWLEISLLEALLLDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILLFFLPYTFLFNLGYDRLRARWIAQRAMA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA