| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451884
Identifier: 126451884
GI number: 126451884
Start: 1129811
End: 1130269
Strand: Direct
Name: 126451884
Synonym: BURPS1106A_1149
Alternate gene names: NA
Gene position: 1129811-1130269 (Clockwise)
Preceding gene: 126452600
Following gene: 126452360
Centisome position: 28.33
GC content: 67.97
Gene sequence:
>459_bases ATGTCCCACGCTATCGCCGTTGCCTTATTTCTCCATCTGCTGGCGGTCGCCGTCTGGGTGGGCGGCATGGTGTTCGCGAA CTTCTGCCTGCGCCCCGCGCTGTCGGACCTGTCGCCGCAATTGCGCCTGCCGCTCGTCGAGGCCGTGTTCGGTCGCTTCT TCAACTGGGTCGCGGGCGCGGTGATCGTGATCCTGCTCACGGGCGGGTTCCTCCTCGTGAAATTCGGCGGCGCGCACGCG ACCTGGCCGCTGCATGCGATGGCCGGGCTCGGCGTCGTGATGATGCTGATCTACGGGCATATCCGCTTCGCGCTGTTTCC GCGCATCCGCCGCGCGGTGCAGGCGCAGAACTGGCCGGACGGCGCGCGTGCGGTCAACGCGGTGCGCCTGCTCGTGATGG TCAATCTCGTGCTGGGCGTCGTGACGATCGGGGCGGCCGTGCTGTCGCGCGGCTTCTGA
Upstream 100 bases:
>100_bases AACCGCCGCGCGTCTCGGCTGTCGAATGCGCTCGACGTCTCGCGCGCCGTGCGTCTGAGCAACGCATCGGTCATTCGAAA ACTAAAAATGGATTCCCATC
Downstream 100 bases:
>100_bases CCTTCGCGCCGGGGCGCGCGGCGCGCCGCGTGCCCCGGCGAGGCGCTAATCGCCGCCGCTGCAAGCGCCGCGCGCCGCGC GCCGTGCCTCGCCTCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSHAIAVALFLHLLAVAVWVGGMVFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGAVIVILLTGGFLLVKFGGAHA TWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPDGARAVNAVRLLVMVNLVLGVVTIGAAVLSRGF
Sequences:
>Translated_152_residues MSHAIAVALFLHLLAVAVWVGGMVFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGAVIVILLTGGFLLVKFGGAHA TWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPDGARAVNAVRLLVMVNLVLGVVTIGAAVLSRGF >Mature_151_residues SHAIAVALFLHLLAVAVWVGGMVFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGAVIVILLTGGFLLVKFGGAHAT WPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPDGARAVNAVRLLVMVNLVLGVVTIGAAVLSRGF
Specific function: Unknown
COG id: COG5615
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16355; Mature: 16224
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAIAVALFLHLLAVAVWVGGMVFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VIVILLTGGFLLVKFGGAHATWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPD HHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARAVNAVRLLVMVNLVLGVVTIGAAVLSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHAIAVALFLHLLAVAVWVGGMVFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VIVILLTGGFLLVKFGGAHATWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPD HHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARAVNAVRLLVMVNLVLGVVTIGAAVLSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA