| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452327
Identifier: 126452327
GI number: 126452327
Start: 1549309
End: 1550145
Strand: Direct
Name: 126452327
Synonym: BURPS1106A_1599
Alternate gene names: NA
Gene position: 1549309-1550145 (Clockwise)
Preceding gene: 126454598
Following gene: 126454611
Centisome position: 38.84
GC content: 70.49
Gene sequence:
>837_bases ATGACGATGGAACGACTGTATCGCGGCATGGATCGCGCGACGCTCGACCGCGCGTACGACAACACGCGGGCCGTAGCGGA TTTTCCGGCGGTGTTGGCCGATTTTTGCCGGCGCAGCGCGCAACTGTACGCGCGCGTTGGCGGCCGGCGCGAGGTGCGAT ACGGCGAGCGGCCGCGCGAGCGTTTCGACTGGCTTTCCTGCGGCCGCGCCGGTGCGCCGCGCTTCGTCTTCATTCACGGC GGTTACTGGCAAAACTGCGCGAAGGAGGATTTCGCGTTCGTGGCCGACGGCCCGCTCGCCGCGGGATTCGACGTCGTGCT CGCCGAATACACGCTCGCGCCCGAGGCGTCGATGACGCAGATCGTCGGCGAGATCGCCCGCCTGCTCGATCGGCTGAGCG CCGATCGCGACGGGCTCGGCGGCGCGGGGCGGCCGCTGTGCCTGAGCGGGCACTCGGCGGGCGGGCATCTGAGCGCCGTG CATCGCGGCCATGCGTGCGTGACGAGCACGCTTGCGATCAGCCCGCTCGTCGATCTCGAACCGATCAGCCTGTCGTGGCT CAACGACAAATTGCGGCTGAGCGAGCGCGAGATCGCCGATTACAGCCCGTTGTTCCATGTCGGCAAGGGCGCGCCGACGA TCGTCGCGGTCGGTGCGCACGAGCTGCCGGAGCTCGTGCGCCACGCGGACGACTACGCGCACGCATGCGCGGCGGCGGGC GAGCCGGTGCGGCGCGTGCACGTGCCGGGGCGCACGCATTTCTCCGTGCTGGAGGAACTGGCGCAGCCGGACGGCGCGCT GACGCGCCTGCTCGGGGCGTTCGTCGGCGGCGCTTGA
Upstream 100 bases:
>100_bases ATAGCGCGGTGCCGAACCGGCGCATTTTTCGGATAGACGAGCGCGGCGGCGCGCACCGACAATCGAGCCGAGGCGTTTTC CCTATCCCACTCACGGGGCA
Downstream 100 bases:
>100_bases CGCGGCGGTGAAGCGCGATCGCGCTTCGTGCGCCGGCGCGCGAGGCGCGGCGCCACGCGCCGCGGCCGGGCGTGCGGGGC TGACCGGGCAACGGTAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Lipase; Kynurenine Formamidase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Domain-Containing Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTMERLYRGMDRATLDRAYDNTRAVADFPAVLADFCRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHG GYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAV HRGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA
Sequences:
>Translated_278_residues MTMERLYRGMDRATLDRAYDNTRAVADFPAVLADFCRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHG GYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAV HRGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA >Mature_277_residues TMERLYRGMDRATLDRAYDNTRAVADFPAVLADFCRRSAQLYARVGGRREVRYGERPRERFDWLSCGRAGAPRFVFIHGG YWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQIVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVH RGHACVTSTLAISPLVDLEPISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAGE PVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=287, Percent_Identity=25.4355400696864, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI224465228, Length=297, Percent_Identity=25.5892255892256, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI19920830, Length=290, Percent_Identity=27.2413793103448, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30132; Mature: 30000
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMERLYRGMDRATLDRAYDNTRAVADFPAVLADFCRRSAQLYARVGGRREVRYGERPRE CCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH RFDWLSCGRAGAPRFVFIHGGYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQ HHHHHHCCCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH IVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVHRGHACVTSTLAISPLVDLE HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC PISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG CCCHHHCCHHHHCCHHHHHHCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA CCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TMERLYRGMDRATLDRAYDNTRAVADFPAVLADFCRRSAQLYARVGGRREVRYGERPRE CHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH RFDWLSCGRAGAPRFVFIHGGYWQNCAKEDFAFVADGPLAAGFDVVLAEYTLAPEASMTQ HHHHHHCCCCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHHHH IVGEIARLLDRLSADRDGLGGAGRPLCLSGHSAGGHLSAVHRGHACVTSTLAISPLVDLE HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCCC PISLSWLNDKLRLSEREIADYSPLFHVGKGAPTIVAVGAHELPELVRHADDYAHACAAAG CCCHHHCCHHHHCCHHHHHHCCCHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC EPVRRVHVPGRTHFSVLEELAQPDGALTRLLGAFVGGA CCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA