Click here to switch to the map view.

The map label for this gene is 126454611

Identifier: 126454611

GI number: 126454611

Start: 1551397

End: 1553298

Strand: Direct

Name: 126454611

Synonym: BURPS1106A_1601

Alternate gene names: NA

Gene position: 1551397-1553298 (Clockwise)

Preceding gene: 126452327

Following gene: 126455389

Centisome position: 38.9

GC content: 68.72

Gene sequence:

>1902_bases
GTGTCGTCGGCATCGGCCGCCGGCGTGCGCAGGCACTTTCGAGAACCGCTGATGGATGAACTCCTCTCATACTACGAACG
GGAACTGGCGTTCCTGCGCCGCCACGTGCGCGATTTCGCCGAGCGCTATCCGAAGATCGCGAGCCGCATGCAGCTCGCGA
GCGGCGCGGACGGCAGCAGCGAGGATCCCCAGGTCGAGCGGCTGTTCGAATCATTCGCGCTGACGGGCGCGCGCGCGTCG
CGGCACATCGACGACGACTACTCCGAGTTCACGAAGGCGTTCGTCGAGGTGCTGTACCCGCATTATCTGCGCGTGTTCCC
GTCGTGCTCGATCGCGTCGTTCGACATCGATGCGAGCCGCGCCGCGCAGATGTCGGCGGCCGTGGTCGTGCCGCGCGGCA
CGCAGCTGTACAGCCGGCCCGTGAGGGGCGCGAAGCTGTTCTTCCGCACCGCGTACGACGTGACGCTGTCGCCGCTGCAA
CTGACGGCCGCGCGCTTTCACGCGATGCCGCAGGCGCCGCGTTCGTTCCGGCTGCCGCCGAACGCGAGCGCGCAGCTCTC
GCTGTCGTTCGCGATCCGCTCGCCGCACGCGAGCGTCGCCGATCTGAAGCTCGATTCCGTTCGCCTGTACACGCGCGGCG
AGCCGCTGATGAGCGCCGCGCTGCGCGACGCGCTGTCGATTCATGCATTGCAGGCGTACGTCGAGCCGGAGCAGGGCGGG
CGCTGGGTGGCGCTCGAGCGCGTGCCCTTCGCGGCCGTCGGCGTGTCGCGCGAGGACAGCCTGATTCCTTGCCCGCAGGG
TGTGCATCCCGCGTATCCGCTGCTGACCGAGTATTTCGCCTTTGCCGAGAAATTCGGCTTCTTCGATTGCGATCTGCGCG
AGGCCGGGCGCCTCGGCAGGCGGCACTTCACGCTTCATCTGCTGCTCAAGGGCATCCCGGCCGATTCCGCGAAGGCGGGC
GTGCTCGAATCGCTGAGCGCCGAGCACGTGCTGCTCGGCTGCACGCCGGTGATCAATCTGTTCGAGACGACAGGCAAGCT
CGGCCAGCAGCCGAGCGCCGCGTCGGGCGCGCACATGCAGCCGCTCGTCGTCGACAAGCAGAATGCCTATGCATACGAAG
TCTATTCGGTCGATGCGGTGACGCAGGTCCAGGAGACGCCGCAGGGCGAGCGCGTCACGACGTTCCCGTCGCTGCATTCG
CTGTACCACGGCGGGCAGGCGGCGCGGGCGTCGCTGTACTGGCGCATGCGGCGCGACGCGCTTGTCGCGAGAAGCGAGCC
GGGGCACGAGCTGTCGCTCGGCTTCGTCGACGGCGCGCTCGATCCGGTCGCGGCGCCGGCCGGCCTCGATTTCAAGCTCA
CATGCAGCAACCGCGATTTGCCGGAGCATCTGCCGCACGGCGCGCCGGGCGGCGATCTGATGATGGAAGGCGGCACGCTC
GCGAGCCGGATCGGCCTGTTGCAGCGGCCCACGCGGCCGCTGCGCTTGCGCGAGGATCGCGGCGTGCTGTGGCGTCTCGT
GTCGCAGCTCTCGTCGAACTCGCTGTTGCTCGCCGGCGGCGCCGGCGCCGTGCGTGACCTGCTCGGGCTGCACGACGTGC
AGGAGTCGCCCGCGACCGTGCGTCAGATCGCGGGCATCGTCGACGTGTCGCAGAAGCCCGTGACCGCGTGGGTATCCGAG
AAGCCGTTCGCGAGCGTCGTGCGGGGGCTCGAGATTCGCATCACGGTCGACGAAGAGTGCTTCGCGGGCACGGGTGTCCA
CACCTTCGCGCAACTGATGGATTGCCTGTTGAGCCGATACGTCGCGCCGAACGGCTTCACGCAGCTCGTGCTCGTGTCGA
GCCGAACCGGCGACGTGCTGTGCACGTGCGCGCGTCGCGCGGGCGGCGGATTCCTGATCTAG

Upstream 100 bases:

>100_bases
CGCGCCGGCCCTGGCTGATTGCCCGTGCAGCGTTCGTCCATCCGGGAGCCGCGCGTCGGCTCCAGCCGTTCGCGCGCTCG
CTTCCCACGCGTGGCCCGCC

Downstream 100 bases:

>100_bases
CCGGACATCGGGCGCCGCGGCGCGCGCTCACGCGGCGGCGGCAAGCTCGGACGCGGTGACGGGTGCGATCGGCGCGGGCG
CGACAAGCATGACGCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 633; Mature: 632

Protein sequence:

>633_residues
MSSASAAGVRRHFREPLMDELLSYYERELAFLRRHVRDFAERYPKIASRMQLASGADGSSEDPQVERLFESFALTGARAS
RHIDDDYSEFTKAFVEVLYPHYLRVFPSCSIASFDIDASRAAQMSAAVVVPRGTQLYSRPVRGAKLFFRTAYDVTLSPLQ
LTAARFHAMPQAPRSFRLPPNASAQLSLSFAIRSPHASVADLKLDSVRLYTRGEPLMSAALRDALSIHALQAYVEPEQGG
RWVALERVPFAAVGVSREDSLIPCPQGVHPAYPLLTEYFAFAEKFGFFDCDLREAGRLGRRHFTLHLLLKGIPADSAKAG
VLESLSAEHVLLGCTPVINLFETTGKLGQQPSAASGAHMQPLVVDKQNAYAYEVYSVDAVTQVQETPQGERVTTFPSLHS
LYHGGQAARASLYWRMRRDALVARSEPGHELSLGFVDGALDPVAAPAGLDFKLTCSNRDLPEHLPHGAPGGDLMMEGGTL
ASRIGLLQRPTRPLRLREDRGVLWRLVSQLSSNSLLLAGGAGAVRDLLGLHDVQESPATVRQIAGIVDVSQKPVTAWVSE
KPFASVVRGLEIRITVDEECFAGTGVHTFAQLMDCLLSRYVAPNGFTQLVLVSSRTGDVLCTCARRAGGGFLI

Sequences:

>Translated_633_residues
MSSASAAGVRRHFREPLMDELLSYYERELAFLRRHVRDFAERYPKIASRMQLASGADGSSEDPQVERLFESFALTGARAS
RHIDDDYSEFTKAFVEVLYPHYLRVFPSCSIASFDIDASRAAQMSAAVVVPRGTQLYSRPVRGAKLFFRTAYDVTLSPLQ
LTAARFHAMPQAPRSFRLPPNASAQLSLSFAIRSPHASVADLKLDSVRLYTRGEPLMSAALRDALSIHALQAYVEPEQGG
RWVALERVPFAAVGVSREDSLIPCPQGVHPAYPLLTEYFAFAEKFGFFDCDLREAGRLGRRHFTLHLLLKGIPADSAKAG
VLESLSAEHVLLGCTPVINLFETTGKLGQQPSAASGAHMQPLVVDKQNAYAYEVYSVDAVTQVQETPQGERVTTFPSLHS
LYHGGQAARASLYWRMRRDALVARSEPGHELSLGFVDGALDPVAAPAGLDFKLTCSNRDLPEHLPHGAPGGDLMMEGGTL
ASRIGLLQRPTRPLRLREDRGVLWRLVSQLSSNSLLLAGGAGAVRDLLGLHDVQESPATVRQIAGIVDVSQKPVTAWVSE
KPFASVVRGLEIRITVDEECFAGTGVHTFAQLMDCLLSRYVAPNGFTQLVLVSSRTGDVLCTCARRAGGGFLI
>Mature_632_residues
SSASAAGVRRHFREPLMDELLSYYERELAFLRRHVRDFAERYPKIASRMQLASGADGSSEDPQVERLFESFALTGARASR
HIDDDYSEFTKAFVEVLYPHYLRVFPSCSIASFDIDASRAAQMSAAVVVPRGTQLYSRPVRGAKLFFRTAYDVTLSPLQL
TAARFHAMPQAPRSFRLPPNASAQLSLSFAIRSPHASVADLKLDSVRLYTRGEPLMSAALRDALSIHALQAYVEPEQGGR
WVALERVPFAAVGVSREDSLIPCPQGVHPAYPLLTEYFAFAEKFGFFDCDLREAGRLGRRHFTLHLLLKGIPADSAKAGV
LESLSAEHVLLGCTPVINLFETTGKLGQQPSAASGAHMQPLVVDKQNAYAYEVYSVDAVTQVQETPQGERVTTFPSLHSL
YHGGQAARASLYWRMRRDALVARSEPGHELSLGFVDGALDPVAAPAGLDFKLTCSNRDLPEHLPHGAPGGDLMMEGGTLA
SRIGLLQRPTRPLRLREDRGVLWRLVSQLSSNSLLLAGGAGAVRDLLGLHDVQESPATVRQIAGIVDVSQKPVTAWVSEK
PFASVVRGLEIRITVDEECFAGTGVHTFAQLMDCLLSRYVAPNGFTQLVLVSSRTGDVLCTCARRAGGGFLI

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69158; Mature: 69026

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSASAAGVRRHFREPLMDELLSYYERELAFLRRHVRDFAERYPKIASRMQLASGADGSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EDPQVERLFESFALTGARASRHIDDDYSEFTKAFVEVLYPHYLRVFPSCSIASFDIDASR
CCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH
AAQMSAAVVVPRGTQLYSRPVRGAKLFFRTAYDVTLSPLQLTAARFHAMPQAPRSFRLPP
HHHCEEEEEECCCCHHHHCCCCCHHEEEEEECCCEECHHHHHHHHHHCCCCCCCCCCCCC
NASAQLSLSFAIRSPHASVADLKLDSVRLYTRGEPLMSAALRDALSIHALQAYVEPEQGG
CCCCEEEEEEEEECCCCCHHHEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RWVALERVPFAAVGVSREDSLIPCPQGVHPAYPLLTEYFAFAEKFGFFDCDLREAGRLGR
EEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
RHFTLHLLLKGIPADSAKAGVLESLSAEHVLLGCTPVINLFETTGKLGQQPSAASGAHMQ
HHEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCC
PLVVDKQNAYAYEVYSVDAVTQVQETPQGERVTTFPSLHSLYHGGQAARASLYWRMRRDA
CEEEECCCCEEEEEEECHHHHHHHHCCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHH
LVARSEPGHELSLGFVDGALDPVAAPAGLDFKLTCSNRDLPEHLPHGAPGGDLMMEGGTL
HHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEECCCHH
ASRIGLLQRPTRPLRLREDRGVLWRLVSQLSSNSLLLAGGAGAVRDLLGLHDVQESPATV
HHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCHHHH
RQIAGIVDVSQKPVTAWVSEKPFASVVRGLEIRITVDEECFAGTGVHTFAQLMDCLLSRY
HHHHHHHCCCCCCCEEECCCCCHHHHHCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHH
VAPNGFTQLVLVSSRTGDVLCTCARRAGGGFLI
CCCCCCEEEEEEECCCCCEEEEEHHHCCCCCCC
>Mature Secondary Structure 
SSASAAGVRRHFREPLMDELLSYYERELAFLRRHVRDFAERYPKIASRMQLASGADGSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EDPQVERLFESFALTGARASRHIDDDYSEFTKAFVEVLYPHYLRVFPSCSIASFDIDASR
CCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH
AAQMSAAVVVPRGTQLYSRPVRGAKLFFRTAYDVTLSPLQLTAARFHAMPQAPRSFRLPP
HHHCEEEEEECCCCHHHHCCCCCHHEEEEEECCCEECHHHHHHHHHHCCCCCCCCCCCCC
NASAQLSLSFAIRSPHASVADLKLDSVRLYTRGEPLMSAALRDALSIHALQAYVEPEQGG
CCCCEEEEEEEEECCCCCHHHEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RWVALERVPFAAVGVSREDSLIPCPQGVHPAYPLLTEYFAFAEKFGFFDCDLREAGRLGR
EEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
RHFTLHLLLKGIPADSAKAGVLESLSAEHVLLGCTPVINLFETTGKLGQQPSAASGAHMQ
HHEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCC
PLVVDKQNAYAYEVYSVDAVTQVQETPQGERVTTFPSLHSLYHGGQAARASLYWRMRRDA
CEEEECCCCEEEEEEECHHHHHHHHCCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHH
LVARSEPGHELSLGFVDGALDPVAAPAGLDFKLTCSNRDLPEHLPHGAPGGDLMMEGGTL
HHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEECCCHH
ASRIGLLQRPTRPLRLREDRGVLWRLVSQLSSNSLLLAGGAGAVRDLLGLHDVQESPATV
HHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCHHHH
RQIAGIVDVSQKPVTAWVSEKPFASVVRGLEIRITVDEECFAGTGVHTFAQLMDCLLSRY
HHHHHHHCCCCCCCEEECCCCCHHHHHCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHH
VAPNGFTQLVLVSSRTGDVLCTCARRAGGGFLI
CCCCCCEEEEEEECCCCCEEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA