Click here to switch to the map view.

The map label for this gene is phnM [H]

Identifier: 126452299

GI number: 126452299

Start: 3262398

End: 3263531

Strand: Reverse

Name: phnM [H]

Synonym: BURPS1106A_3339

Alternate gene names: 126452299

Gene position: 3263531-3262398 (Counterclockwise)

Preceding gene: 126455192

Following gene: 126453417

Centisome position: 81.82

GC content: 71.78

Gene sequence:

>1134_bases
ATGTTGATCAGCAATGCGCGCGTCGTCACGCGCGACGACGTTTTCATCGGCACCGTGCAGATCGACGGCGAATCGATCCG
CGCGGTGTCGCGCGGGACGACCGCCGCGCGCGACGCCGACGATTGGGGCGGCGACTATCTGCTGCCCGGGCTCGTCGAGC
TGCATACCGACAACCTGGAGAAGCATCTCGCGCCGCGGCCGGGCGTGTACTGGAACGTCGATGCGGCGTTCGTCACGCAC
GACGCGCAGGTCGCGGCGGCAGGCATCACGACGGTGTTCGACGCGCTCGCGATCGGCACGCGGCTGAACGTCGGCGTGCG
CGGGCGCGACGTGCAGACGCAGTGCGCGGACGCGCTCGCGCGCTTCGCGTCGCACGGGCTGCTGCGCGCCGAGCACTTCC
TGCACCTGCGCTGCGAGATCGCGACGGAGGACGTCGTCGACGTGTTCGATTCGCTCGCGCGCCATCCGCGCCTGCGGCTC
GCGTCGGTGATGGACCATACGCCGGGGCAGCGGCAGTGGAAGGATCCGCAGCAATGGCGCCACTATCAGGAACGGCATCG
CAAGTGGTCCGACGAGGAGGCGGCGACGACGATCGCCGAGCTGGCCGACGAGCAGCAGCGCTACGCGGACGCGCACCGGC
GCGCGATCGTCGCGCGCTGCCGCGCGCTCGGCGTGCCCGTCGCGAGTCATGACGACACGGTGATCGAGCACGTCGAGCAG
GCGGCGCGGGAGGGCATCGCGCTCGCCGAGTTTCCGACGACGCACGCGGCGGCCGAAGCGGCGCACGCGCGCGGCATCGC
GACGGTGATGGGCGCGCCGAACCTCGTGCGCGGCGGCTCGCATTCGGGCAATGTGTCGGCGCTCGCGCTCGCGCGGGCGG
GGCTCCTCGATATCCTGTCGTCCGACTACGTGCCGTCGAGCCTGCTATGCGCGGCGTTCGACCTCGTGCACCAGGCGCAC
TGGAGCCTGCCGCGCGCGATCGACACGGTGTCGGGCTCGCCGGCGCGCCATACGGGGCTTCGCGATCGCGGCGAAATCGC
GCCGGGGCTGCGTGCGGATTTCGTGCGTGTCGCGCTGCACGGCACGCTGCCCGTGCCGCGCGCGACATATGTTCGCGGGC
GCCGCGTCGTGTAG

Upstream 100 bases:

>100_bases
AAGCGACGCGCGAGCGCGTCGCGACGCGCTGTTTCCCGCTGCGCCCGCCGTCGCGCGCGCGGCTGCCCTTTGACGAAGTG
AACGCTTAGCGGAGCGAACG

Downstream 100 bases:

>100_bases
CGCTTCGCATCGATTCGCGCGCGCTTGAACGGGCCGGACCCTCGGGGCGGCCCGTTTTGCTTGCGACGCGCGGGCGTTCG
CGCGGCTCGCCCGTTCGCGG

Product: phosphonate metabolism protein PhnM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MLISNARVVTRDDVFIGTVQIDGESIRAVSRGTTAARDADDWGGDYLLPGLVELHTDNLEKHLAPRPGVYWNVDAAFVTH
DAQVAAAGITTVFDALAIGTRLNVGVRGRDVQTQCADALARFASHGLLRAEHFLHLRCEIATEDVVDVFDSLARHPRLRL
ASVMDHTPGQRQWKDPQQWRHYQERHRKWSDEEAATTIAELADEQQRYADAHRRAIVARCRALGVPVASHDDTVIEHVEQ
AAREGIALAEFPTTHAAAEAAHARGIATVMGAPNLVRGGSHSGNVSALALARAGLLDILSSDYVPSSLLCAAFDLVHQAH
WSLPRAIDTVSGSPARHTGLRDRGEIAPGLRADFVRVALHGTLPVPRATYVRGRRVV

Sequences:

>Translated_377_residues
MLISNARVVTRDDVFIGTVQIDGESIRAVSRGTTAARDADDWGGDYLLPGLVELHTDNLEKHLAPRPGVYWNVDAAFVTH
DAQVAAAGITTVFDALAIGTRLNVGVRGRDVQTQCADALARFASHGLLRAEHFLHLRCEIATEDVVDVFDSLARHPRLRL
ASVMDHTPGQRQWKDPQQWRHYQERHRKWSDEEAATTIAELADEQQRYADAHRRAIVARCRALGVPVASHDDTVIEHVEQ
AAREGIALAEFPTTHAAAEAAHARGIATVMGAPNLVRGGSHSGNVSALALARAGLLDILSSDYVPSSLLCAAFDLVHQAH
WSLPRAIDTVSGSPARHTGLRDRGEIAPGLRADFVRVALHGTLPVPRATYVRGRRVV
>Mature_377_residues
MLISNARVVTRDDVFIGTVQIDGESIRAVSRGTTAARDADDWGGDYLLPGLVELHTDNLEKHLAPRPGVYWNVDAAFVTH
DAQVAAAGITTVFDALAIGTRLNVGVRGRDVQTQCADALARFASHGLLRAEHFLHLRCEIATEDVVDVFDSLARHPRLRL
ASVMDHTPGQRQWKDPQQWRHYQERHRKWSDEEAATTIAELADEQQRYADAHRRAIVARCRALGVPVASHDDTVIEHVEQ
AAREGIALAEFPTTHAAAEAAHARGIATVMGAPNLVRGGSHSGNVSALALARAGLLDILSSDYVPSSLLCAAFDLVHQAH
WSLPRAIDTVSGSPARHTGLRDRGEIAPGLRADFVRVALHGTLPVPRATYVRGRRVV

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=357, Percent_Identity=42.5770308123249, Blast_Score=284, Evalue=6e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 41046; Mature: 41046

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISNARVVTRDDVFIGTVQIDGESIRAVSRGTTAARDADDWGGDYLLPGLVELHTDNLE
CEECCCEEEEECCEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHH
KHLAPRPGVYWNVDAAFVTHDAQVAAAGITTVFDALAIGTRLNVGVRGRDVQTQCADALA
HHCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH
RFASHGLLRAEHFLHLRCEIATEDVVDVFDSLARHPRLRLASVMDHTPGQRQWKDPQQWR
HHHHCCHHHHHHEEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHH
HYQERHRKWSDEEAATTIAELADEQQRYADAHRRAIVARCRALGVPVASHDDTVIEHVEQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AAREGIALAEFPTTHAAAEAAHARGIATVMGAPNLVRGGSHSGNVSALALARAGLLDILS
HHHCCCEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SDYVPSSLLCAAFDLVHQAHWSLPRAIDTVSGSPARHTGLRDRGEIAPGLRADFVRVALH
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHEEEEEE
GTLPVPRATYVRGRRVV
CCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLISNARVVTRDDVFIGTVQIDGESIRAVSRGTTAARDADDWGGDYLLPGLVELHTDNLE
CEECCCEEEEECCEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHH
KHLAPRPGVYWNVDAAFVTHDAQVAAAGITTVFDALAIGTRLNVGVRGRDVQTQCADALA
HHCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH
RFASHGLLRAEHFLHLRCEIATEDVVDVFDSLARHPRLRLASVMDHTPGQRQWKDPQQWR
HHHHCCHHHHHHEEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHH
HYQERHRKWSDEEAATTIAELADEQQRYADAHRRAIVARCRALGVPVASHDDTVIEHVEQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AAREGIALAEFPTTHAAAEAAHARGIATVMGAPNLVRGGSHSGNVSALALARAGLLDILS
HHHCCCEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SDYVPSSLLCAAFDLVHQAHWSLPRAIDTVSGSPARHTGLRDRGEIAPGLRADFVRVALH
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHEEEEEE
GTLPVPRATYVRGRRVV
CCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]