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The map label for this gene is hip [H]

Identifier: 126452268

GI number: 126452268

Start: 236015

End: 236329

Strand: Direct

Name: hip [H]

Synonym: BURPS1106A_0252

Alternate gene names: 126452268

Gene position: 236015-236329 (Clockwise)

Preceding gene: 126454680

Following gene: 126454714

Centisome position: 5.92

GC content: 66.35

Gene sequence:

>315_bases
ATGAAAACGTCCCGCCGGAGTTTCCTGATCACGAGCGTCGGCGCCGTGTCGGCGCTCGCGCTCACGCGCGAAGCGTTCTC
CGCCGATTTGCCGATGCTGTCCGAAACCGATCCGACCGCCGTTGCGCTCGGCTACAAGGCCGACGCCACCAAGGTCGACA
AGGCGAAGTTCCCGAAATACGCGGCAGGCGAAGCCTGTGCGGGCTGCATGCTGTATCAGGGCAAGAAGGGCTCGGCGTCG
GGCCCGTGCGGCGCGTTCCCCGGCAAGCAGGTGGCGGCGAAGGGCTGGTGCAACGCGTTCACGAAGATGGCGTGA

Upstream 100 bases:

>100_bases
TCTTCGGAATTACTCGCGACACATCGGGGCGCATGAGCGGTATGCTTGTGCGCTGCTGCCGCTAGAGCAGCGATAACCCA
CAATGTTGGAGCGAATGCCC

Downstream 100 bases:

>100_bases
CGCGGGCCTGACGCGGCGCGCGTCGTCCCGCCGCACTGCATCGAAGCGGAAAAATACCCGCCGTCGTTCGGACGGCGGGT
ATTTTTTTATTGCTTGAAAT

Product: high-potential iron-sulfur protein

Products: NA

Alternate protein names: HiPIP [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKTSRRSFLITSVGAVSALALTREAFSADLPMLSETDPTAVALGYKADATKVDKAKFPKYAAGEACAGCMLYQGKKGSAS
GPCGAFPGKQVAAKGWCNAFTKMA

Sequences:

>Translated_104_residues
MKTSRRSFLITSVGAVSALALTREAFSADLPMLSETDPTAVALGYKADATKVDKAKFPKYAAGEACAGCMLYQGKKGSAS
GPCGAFPGKQVAAKGWCNAFTKMA
>Mature_104_residues
MKTSRRSFLITSVGAVSALALTREAFSADLPMLSETDPTAVALGYKADATKVDKAKFPKYAAGEACAGCMLYQGKKGSAS
GPCGAFPGKQVAAKGWCNAFTKMA

Specific function: Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the high-potential iron-sulfur protein (HiPIP) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000170
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01355 HIPIP [H]

EC number: NA

Molecular weight: Translated: 10747; Mature: 10747

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00596 HIPIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSRRSFLITSVGAVSALALTREAFSADLPMLSETDPTAVALGYKADATKVDKAKFPKY
CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCC
AAGEACAGCMLYQGKKGSASGPCGAFPGKQVAAKGWCNAFTKMA
CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTSRRSFLITSVGAVSALALTREAFSADLPMLSETDPTAVALGYKADATKVDKAKFPKY
CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCC
AAGEACAGCMLYQGKKGSASGPCGAFPGKQVAAKGWCNAFTKMA
CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]