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The map label for this gene is ugpQ [H]

Identifier: 126452263

GI number: 126452263

Start: 3662765

End: 3663526

Strand: Reverse

Name: ugpQ [H]

Synonym: BURPS1106A_3751

Alternate gene names: 126452263

Gene position: 3663526-3662765 (Counterclockwise)

Preceding gene: 126455006

Following gene: 126452625

Centisome position: 91.85

GC content: 72.31

Gene sequence:

>762_bases
ATGACGAACCTGCAAACCTGGCCTTATCCGCGCGTGGTCGCGCACCGCGGCGGCGGCGCGCTGGCTCCCGAGAACACGCT
CGCCGCGCTCGACGCCGGCGCGCACTACGGGCACAAGATGGTCGAATTCGATGCGAAGCTGTCGGCGGACGGCGTCGCGT
TCCTGCTGCACGACGACACGGTCGAGCGCACGTCGAACGGCGCGGGCGCCGCGCGCGACATGCGCTACGCGGCGCTCGAG
GCGCTCGACGCCGGCGCGTGGTATGACGCGCGCTTCTCGGGCGAGCGGATGCCGACGCTCGCGCAGGCGGCGGCGCGCTG
CCTCGCGCTCGGCCTCGCGGCGAACGTCGAGATCAAGCCGTGCCCGGAGCGCGATGCGGAAACGGGCAGCGTCGTCGCGG
CGCTGGCGGCCGAGCTCTGGCGCGACGCCGCCGTGCCGCCGCTGCTGTCGTCGTTTTCGGCCGCCGCGCTCGACGCGGCG
CGCGAGGCCGCGCCGGCGCTGCCGCGCGGGATGCTGTACGAGGAGATTCCGGCCGGCTGGCTGGAACAGACGCAACGGCT
CGGCTGCGTGTCGCTGCACGCGCACCATGCGCAATTCAACGCGGCGCTCGTGCGCGACTTGAAGGCGTCGGGGTTGCGCC
TTCTCGCGTACACGGTGAACGACCCCGTTCGCGCGCGCGAACTCGCCGATTGGGGCGTGGACCTCATTTGCACGGACCGG
ATCGACCTGATCGGCGCGGATTTCGCCGATCGGGAAGGATGA

Upstream 100 bases:

>100_bases
TGCCCGCGCGGCACCTGCACTTCTTCGATCCGGCGACGGGCAAGCGCGCCGGCTGATTCGAGTCCCCGAGCCCCGGCTCG
CGGTTTCCGACGAGAGAGCG

Downstream 100 bases:

>100_bases
AACCGGCGTTTTGCGCGGCGAGCGGGAACGAAATCGCTCCGGCGGGCTGCCGCCGGAGCACGAGGCGACGAGCGCCTCGT
AACCTCAGGAAAATTCCGCT

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTNLQTWPYPRVVAHRGGGALAPENTLAALDAGAHYGHKMVEFDAKLSADGVAFLLHDDTVERTSNGAGAARDMRYAALE
ALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKPCPERDAETGSVVAALAAELWRDAAVPPLLSSFSAAALDAA
REAAPALPRGMLYEEIPAGWLEQTQRLGCVSLHAHHAQFNAALVRDLKASGLRLLAYTVNDPVRARELADWGVDLICTDR
IDLIGADFADREG

Sequences:

>Translated_253_residues
MTNLQTWPYPRVVAHRGGGALAPENTLAALDAGAHYGHKMVEFDAKLSADGVAFLLHDDTVERTSNGAGAARDMRYAALE
ALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKPCPERDAETGSVVAALAAELWRDAAVPPLLSSFSAAALDAA
REAAPALPRGMLYEEIPAGWLEQTQRLGCVSLHAHHAQFNAALVRDLKASGLRLLAYTVNDPVRARELADWGVDLICTDR
IDLIGADFADREG
>Mature_252_residues
TNLQTWPYPRVVAHRGGGALAPENTLAALDAGAHYGHKMVEFDAKLSADGVAFLLHDDTVERTSNGAGAARDMRYAALEA
LDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKPCPERDAETGSVVAALAAELWRDAAVPPLLSSFSAAALDAAR
EAAPALPRGMLYEEIPAGWLEQTQRLGCVSLHAHHAQFNAALVRDLKASGLRLLAYTVNDPVRARELADWGVDLICTDRI
DLIGADFADREG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=157, Percent_Identity=32.484076433121, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI284055245, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI284055240, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI21361649, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI284055242, Length=92, Percent_Identity=40.2173913043478, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1789858, Length=246, Percent_Identity=58.130081300813, Blast_Score=289, Evalue=1e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26971; Mature: 26839

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLQTWPYPRVVAHRGGGALAPENTLAALDAGAHYGHKMVEFDAKLSADGVAFLLHDDT
CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCH
VERTSNGAGAARDMRYAALEALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKP
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECC
CPERDAETGSVVAALAAELWRDAAVPPLLSSFSAAALDAAREAAPALPRGMLYEEIPAGW
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
LEQTQRLGCVSLHAHHAQFNAALVRDLKASGLRLLAYTVNDPVRARELADWGVDLICTDR
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEEEECC
IDLIGADFADREG
CCEECCCCCCCCC
>Mature Secondary Structure 
TNLQTWPYPRVVAHRGGGALAPENTLAALDAGAHYGHKMVEFDAKLSADGVAFLLHDDT
CCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCH
VERTSNGAGAARDMRYAALEALDAGAWYDARFSGERMPTLAQAAARCLALGLAANVEIKP
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECC
CPERDAETGSVVAALAAELWRDAAVPPLLSSFSAAALDAAREAAPALPRGMLYEEIPAGW
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH
LEQTQRLGCVSLHAHHAQFNAALVRDLKASGLRLLAYTVNDPVRARELADWGVDLICTDR
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEEEECC
IDLIGADFADREG
CCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]