| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452625
Identifier: 126452625
GI number: 126452625
Start: 3660982
End: 3661695
Strand: Reverse
Name: 126452625
Synonym: BURPS1106A_3749
Alternate gene names: NA
Gene position: 3661695-3660982 (Counterclockwise)
Preceding gene: 126452263
Following gene: 126454893
Centisome position: 91.81
GC content: 68.07
Gene sequence:
>714_bases ATGGCACGGCTAGCACGACTTTACGTTCCCGATCAGCCGCAGCACGTGATATTACGCGGCCTCGATCAGCAACCGGCGTT CGTCGACGACCAGGATTACGAATTATTCATCGATTGCCTGAAGGCGGCGGCGCGCGATCATCATCTGGCGGTGCATGCCT ACGTGCTGCTGCCGCGCCAGGTCCAGCTCCTCGTGACGCCAAGCGACGAGGCAAGCCTGCCGAAGGCGATGCAGGCCGTC GGCCGCCGCTACGTCGCGCATTTCAACCGGCGCTACTCGCGGCGCGGCACGCTGTGGGAAGGGCGCTATCGCGCGACCGT CATCGAGGGCGAGCGCTACTTCCTGCTCGCGAGCCGCGTCGTCGAGATGAGCCCCGTGCGCGCGCAACTCGTGACGAGCG CGGATGCGTACCGCTGGTCGAGCTATCGGCATCACGTCGGCCTCACCGTCGACAGCCTGATTACCGACCATCCGCTCTAC TGGGCGCTCGGCAACACGCCGTTCGAGCGGCAGCGCGCGTACAAGGAGCTGTGCGAGCAGCCGCTCGACGAGCGCCAGGC CGACCAGCTCCAGCAGGCGACGCTCAAGGGCTGGGTGCTGGGCGGCGAGACCTACCGCGAGTGGGCGGCGCGCACGGCGA ACCGGCGCGTCTCGCCGCTGCCGCGCGGGCGGCCGCGCAAGGTGCGCGAAAACACGCCGCCCATTCAGCAGTGA
Upstream 100 bases:
>100_bases CGCACGACCGTGCGTATTCCCGCACCGCGGCGGGCTTTGACGCGGACGCACTTGTACGGGCCTTCGGGTATTTCCTAACG CGATCAAACGGACATTCAGC
Downstream 100 bases:
>100_bases GCGTGCCGGCGGCGGGCGCGAGGCGGCATCCGCGGATGCCGCTTGTTTTTGCCCCATTTTGATGCGGCCCCAATAAATCG CGATAATCGTGCACCAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHHLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAV GRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVEMSPVRAQLVTSADAYRWSSYRHHVGLTVDSLITDHPLY WALGNTPFERQRAYKELCEQPLDERQADQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENTPPIQQ
Sequences:
>Translated_237_residues MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHHLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAV GRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVEMSPVRAQLVTSADAYRWSSYRHHVGLTVDSLITDHPLY WALGNTPFERQRAYKELCEQPLDERQADQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENTPPIQQ >Mature_236_residues ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHHLAVHAYVLLPRQVQLLVTPSDEASLPKAMQAVG RRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRVVEMSPVRAQLVTSADAYRWSSYRHHVGLTVDSLITDHPLYW ALGNTPFERQRAYKELCEQPLDERQADQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENTPPIQQ
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27485; Mature: 27353
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHHLAVHAYVLLPRQ CCCCEEEECCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCE VQLLVTPSDEASLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRV EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEEEHHH VEMSPVRAQLVTSADAYRWSSYRHHVGLTVDSLITDHPLYWALGNTPFERQRAYKELCEQ HHHCCHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC PLDERQADQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENTPPIQQ CCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAAARDHHLAVHAYVLLPRQ CCCEEEECCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCE VQLLVTPSDEASLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGERYFLLASRV EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEEEHHH VEMSPVRAQLVTSADAYRWSSYRHHVGLTVDSLITDHPLYWALGNTPFERQRAYKELCEQ HHHCCHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC PLDERQADQLQQATLKGWVLGGETYREWAARTANRRVSPLPRGRPRKVRENTPPIQQ CCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA