| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pucI [H]
Identifier: 126452220
GI number: 126452220
Start: 2392493
End: 2394025
Strand: Reverse
Name: pucI [H]
Synonym: BURPS1106A_2434
Alternate gene names: 126452220
Gene position: 2394025-2392493 (Counterclockwise)
Preceding gene: 126452872
Following gene: 126453356
Centisome position: 60.02
GC content: 65.1
Gene sequence:
>1533_bases ATGACGATCGCGCGGCTCGTCCGCGGCAGGCAAGGAGATGTCATGGCTCAGTTCAGTGTGGCGCGGCAAAGCGCCTCGTA TCGGCCGAACGAGGATCGCGCCGGCGGCCCGGATGGCGGCGCTCAGATGCCCGCCGGCTACAGCAGTCGTCTGTACAACG AAGATCTCGCGCCGCTCGCGAGCCAGCGCTGGGGCGCATACAACATCTTCGCGTTCTGGATGTCGGACGTGCACAGCGTC GGCGGCTACGTGTTTGCGGGCAGCCTGTTCGCGCTCGGTCTGACGAGCTGGCAGGTGCTCGTCGCGCTGATCGTCGGCAT TTCGATCGTCAACGTGCTGTGCAACCTGATCGCGAGGCCGAGCCAGCAGCTAGGCGTGCCGTATCCGGTGGCATGCCGCG CGACGTTCGGCGTGCTCGGCGCGAACGTGCCCGCGGTGATCCGCGGCCTCATCGCGATCGCATGGTACGGCATCCAAACT TATCTGGCGTCGAGCGCGCTCGTGATCGTCGTGCTCAAGTTCTTTCCGCACTGGATGCCGTACGCGGACGTGCATCGCTA CGGCTTTCTCGGGCTGTCGGCGCTCGGCTGGGCGGGCTTCATGCTGCTGTGGGTGCTGCAGGCGTTCGTGTTCTGGAACG GCATGGAGACGATCAAGAAGTTCATCGATTTCGCCGGCCCCGCCGTCTACGTGGTGATGTTCGCCCTCGCGGGCTACATG GTATGGCGCGCGGGCTGGCGCAATATCGGCCTGAATCTCGGCGGCGTCCGGTATCACGGCGCCGAAGTGATTCCGGTGAT GGTGACGGCGATCTCGCTCGTCGTGTCGTATTTCTCGGGGCCGATGCTCAACTTCGGCGATTTCTCGCGTTATTGCAGCA GCTACGGCGGCGTGAAGCGCGGCAATTTCTGGGGGCTGCCCGTCAATTTCCTCGCGTTCTCGCTCGTCACCGTGATCACG ACGGCCGCGACGCTGCCGGTGTTCGGAGAACTGATCACCGATCCCGTCGAGACGGTCGGGCGCATCGATCATCCGAGCGC CGTGATACTTGGCGCGCTGACCTTCACGATCGCGACGATCGGCATCAACATCGTCGCGAATTTCGTGTCGCCCGCGTTCG ATTTCTCGAACGTCGCGCCGCGCCTGATCAGTTGGCGCGCGGGCGGGATGCTCGCGGCGGTCGCATCGGTGTTCATCACG CCGTGGAATCTCTTCAACAATCCCGCGGTGATCCATTACACGCTCGACGTGCTCGGCAGCTTCATCGGGCCGCTGTACGG CGTGCTGATCGTCGATTTCTATCTCGTGAAGCGCGGCGCGCTGCGGCGCGACGATCTGTACACGACGTCGGCCGACGGCG CGTACTGGTATCGCGACGGCGTGAACCGGCGCGCGATCGCCGCGCTGTTGCCCGCGGCCGCGATCGCCGTCGCATGCGTG ATGGCGCCCGCGCTGTCCGGGCTCGCGAATTTCTCGTGGTTCATCGGCGCGGCGCTCGGCGGCGCGTTCTATCGCGCGCT CGCGAAAGCATGA
Upstream 100 bases:
>100_bases CGCCGAACGCGCTCACTGAACTGACGAAATGCCGGGCGGCCGCGTGTGCGGACGCCTCGCCAGGGCGGCATCGGGCGATC CCGTTCGAGCCGCGATTTCA
Downstream 100 bases:
>100_bases CGGAGTCCCCATGAAAATAAAGCTGATCAATCCGAACACGACGCGGCGGATGACCGACGCGATGGGCCGTTGCGCGCGCG AGGTCGCGTCGGCGGGCACG
Product: NCS1 nucleoside transporter family protein
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTIARLVRGRQGDVMAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWMSDVHSV GGYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQT YLASSALVIVVLKFFPHWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYM VWRAGWRNIGLNLGGVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFSLVTVIT TAATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFIT PWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACV MAPALSGLANFSWFIGAALGGAFYRALAKA
Sequences:
>Translated_510_residues MTIARLVRGRQGDVMAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWMSDVHSV GGYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQT YLASSALVIVVLKFFPHWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYM VWRAGWRNIGLNLGGVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFSLVTVIT TAATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFIT PWNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACV MAPALSGLANFSWFIGAALGGAFYRALAKA >Mature_509_residues TIARLVRGRQGDVMAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWMSDVHSVG GYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTY LASSALVIVVLKFFPHWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYMV WRAGWRNIGLNLGGVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFSLVTVITT AATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITP WNLFNNPAVIHYTLDVLGSFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACVM APALSGLANFSWFIGAALGGAFYRALAKA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=471, Percent_Identity=28.6624203821656, Blast_Score=189, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319495, Length=485, Percent_Identity=25.5670103092783, Blast_Score=156, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6322219, Length=455, Percent_Identity=23.7362637362637, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319429, Length=476, Percent_Identity=22.8991596638655, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6323266, Length=472, Percent_Identity=23.0932203389831, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324766, Length=472, Percent_Identity=22.2457627118644, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324645, Length=468, Percent_Identity=20.9401709401709, Blast_Score=91, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 55041; Mature: 54910
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIARLVRGRQGDVMAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLA CCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH SQRWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARP HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKFFPHWMP HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH VWRAGWRNIGLNLGGVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKR HHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC GNFWGLPVNFLAFSLVTVITTAATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGS HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHH FIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACV HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH MAPALSGLANFSWFIGAALGGAFYRALAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIARLVRGRQGDVMAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLA CHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHH SQRWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARP HCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALVIVVLKFFPHWMP HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH VWRAGWRNIGLNLGGVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKR HHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC GNFWGLPVNFLAFSLVTVITTAATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGS HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHH FIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACV HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH MAPALSGLANFSWFIGAALGGAFYRALAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]