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The map label for this gene is 126452108

Identifier: 126452108

GI number: 126452108

Start: 1160167

End: 1160535

Strand: Direct

Name: 126452108

Synonym: BURPS1106A_1180

Alternate gene names: NA

Gene position: 1160167-1160535 (Clockwise)

Preceding gene: 126453232

Following gene: 126455027

Centisome position: 29.09

GC content: 65.04

Gene sequence:

>369_bases
ATGAAGAAGCCTCAGACGGCACTCAAGACGGCGGCGGCGCTCGCGCTCGCAGCCGGCTTCGCGATCGGCACCGCGCATGC
GGCGAACGTCGCGAAGGGCAAGGAACTCGTCGAGTCGCACAACTGCGCGGCCTGCCACGGCGCGAAGCTCGACAATCCGA
TCAACGCCGAATATCCGCGCCTCGCGGGCCAGCACGCCGACTATCTGGTCTGGGCGATGCGCCAGTATCAGATGGGCCTG
ACGAACCCGCTCCTCGGCCGCAACAACGCGATCATGCAGGCGCAGGTGCAGAGCCTGTCCATCGCCGACATGAAGGACAT
CGCCGCGTACCTCGAATCGCTGCAGGGCAGCCTCGTGTTCAAGAAGTAA

Upstream 100 bases:

>100_bases
GATCTCGCGTCCTACTACGCCGCGCAAAAGCCCGATTCGAAGAACAATCCCTACAAGTAAGCTCGCGCTTGCTGACCTCA
GCACCGGGATAGGAGCATCC

Downstream 100 bases:

>100_bases
CGCCGGTACGCAGGCGTCGCGCGCGCGTTCTCGCCGCGCGTCCGGAAGAATGCCCCGCCTCGTGCGGGGTATTTTTTTGC
CCGGCGTATTTGCCCGGTGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome; Cytochrome C Family Protein; Cytochrome C -Related Protein; Class I Cytochrome C; Cytochrome C Class IC; Cytochrome C-Type Protein; Cytochrome C; Periplasmic Cytochrome

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKPQTALKTAAALALAAGFAIGTAHAANVAKGKELVESHNCAACHGAKLDNPINAEYPRLAGQHADYLVWAMRQYQMGL
TNPLLGRNNAIMQAQVQSLSIADMKDIAAYLESLQGSLVFKK

Sequences:

>Translated_122_residues
MKKPQTALKTAAALALAAGFAIGTAHAANVAKGKELVESHNCAACHGAKLDNPINAEYPRLAGQHADYLVWAMRQYQMGL
TNPLLGRNNAIMQAQVQSLSIADMKDIAAYLESLQGSLVFKK
>Mature_122_residues
MKKPQTALKTAAALALAAGFAIGTAHAANVAKGKELVESHNCAACHGAKLDNPINAEYPRLAGQHADYLVWAMRQYQMGL
TNPLLGRNNAIMQAQVQSLSIADMKDIAAYLESLQGSLVFKK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13021; Mature: 13021

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPQTALKTAAALALAAGFAIGTAHAANVAKGKELVESHNCAACHGAKLDNPINAEYPR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
LAGQHADYLVWAMRQYQMGLTNPLLGRNNAIMQAQVQSLSIADMKDIAAYLESLQGSLVF
HCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
KK
CC
>Mature Secondary Structure
MKKPQTALKTAAALALAAGFAIGTAHAANVAKGKELVESHNCAACHGAKLDNPINAEYPR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
LAGQHADYLVWAMRQYQMGLTNPLLGRNNAIMQAQVQSLSIADMKDIAAYLESLQGSLVF
HCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA