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The map label for this gene is 126453232

Identifier: 126453232

GI number: 126453232

Start: 1159767

End: 1160126

Strand: Direct

Name: 126453232

Synonym: BURPS1106A_1179

Alternate gene names: NA

Gene position: 1159767-1160126 (Clockwise)

Preceding gene: 126453342

Following gene: 126452108

Centisome position: 29.08

GC content: 62.78

Gene sequence:

>360_bases
ATGAATAAATTCGGCAAACATGTCGTTGTCGCAGCAGCGCTCGCGGCGCTCGCCGCCGGCGCGCAGGCGGCCGGTGTGGT
CGGCAACCCGAAGGACGGGGCGAGCAAGGCCGCGATGTGCATCGGCTGTCACGGCATCGACGGCTACCGCGTGGCCTACC
CGGAGGTCTACCGGGTGCCGCTCCTCGGCGGCCAGAACCAGGTTTATCTCGAGAATGCGCTGAAGGCCTACCGGAAGAAG
GATCGCCATTTCCCGTCGATGAACGCGATCGCCGAATCGCTGACGGATCAGGACATCGCCGATCTCGCGTCCTACTACGC
CGCGCAAAAGCCCGATTCGAAGAACAATCCCTACAAGTAA

Upstream 100 bases:

>100_bases
TGGCCGTTTTTTTGGCCTGCGTGGCGGCCTCACAAGTAAAACGGCGCCGGCCGTTGCCTTTGCGGGCGCCAGTTTCCCCT
CAAGCTAGGTTACAAGAGCT

Downstream 100 bases:

>100_bases
GCTCGCGCTTGCTGACCTCAGCACCGGGATAGGAGCATCCATGAAGAAGCCTCAGACGGCACTCAAGACGGCGGCGGCGC
TCGCGCTCGCAGCCGGCTTC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNKFGKHVVVAAALAALAAGAQAAGVVGNPKDGASKAAMCIGCHGIDGYRVAYPEVYRVPLLGGQNQVYLENALKAYRKK
DRHFPSMNAIAESLTDQDIADLASYYAAQKPDSKNNPYK

Sequences:

>Translated_119_residues
MNKFGKHVVVAAALAALAAGAQAAGVVGNPKDGASKAAMCIGCHGIDGYRVAYPEVYRVPLLGGQNQVYLENALKAYRKK
DRHFPSMNAIAESLTDQDIADLASYYAAQKPDSKNNPYK
>Mature_119_residues
MNKFGKHVVVAAALAALAAGAQAAGVVGNPKDGASKAAMCIGCHGIDGYRVAYPEVYRVPLLGGQNQVYLENALKAYRKK
DRHFPSMNAIAESLTDQDIADLASYYAAQKPDSKNNPYK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12672; Mature: 12672

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFGKHVVVAAALAALAAGAQAAGVVGNPKDGASKAAMCIGCHGIDGYRVAYPEVYRVP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEECCCCCCCEEECCCEEEEC
LLGGQNQVYLENALKAYRKKDRHFPSMNAIAESLTDQDIADLASYYAAQKPDSKNNPYK
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNKFGKHVVVAAALAALAAGAQAAGVVGNPKDGASKAAMCIGCHGIDGYRVAYPEVYRVP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEECCCCCCCEEECCCEEEEC
LLGGQNQVYLENALKAYRKKDRHFPSMNAIAESLTDQDIADLASYYAAQKPDSKNNPYK
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]