| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452099
Identifier: 126452099
GI number: 126452099
Start: 2033402
End: 2034439
Strand: Reverse
Name: 126452099
Synonym: BURPS1106A_2051
Alternate gene names: NA
Gene position: 2034439-2033402 (Counterclockwise)
Preceding gene: 126454435
Following gene: 126453259
Centisome position: 51.01
GC content: 57.51
Gene sequence:
>1038_bases GTGTACTTCGAAAGCGGGAACTCTCCGACCTACAATTCGAATATCCCTTATATCGATGTTCAGATTTGCGTACCGGGAAC GAGCCAATGCGTCAGGGTCGATCACGTGCAAGTCGATAGTGGATCGACCGGACTGCGCATAATGAAGTCGGCCTTGAATG GATTGACTCTCCCATTGCAGGCCAATACGAGCGGTGCGCAGATCAGCGAGTGCATGGCGTATGCCACCAGCGAAGTCTGG GGGCCGGTTGCCCGTAGCGACGTTTACGTGGGCGGAGAATTCGGCGGTAACCAGACGCTACAGGTTATTGACGATAGCGC TTCGGCGAGCGTCCCCGCCAGTTGCAGCTCACAGGGGGCACTGACCGACACGACGAGCAGCTTTGGCGGCAAGGGAATCA TCGGAATCAATCAGCTGTTTAGCGATGGCGGCAGCTACTACGCATGTACCGGCACCGGATGCTCGCAGCTAGACAGCAGT CCCGTGACGGTCACCAATCCGGTGGCTGGCTTCGCCCAGGACAACAATGGCGTGTCGATCCAAATTCAGCCGATTTCGGA CCTCGGTGCGACGTCGGCATCCGGACAACTGATCTTCGGTATCAACACGGCAAGCAACAATCGAATCGCTGGGGCAGCGA TACTGTACACGGACAAGAACGGCGATCTCTCGGTCAACACGGGTACGCGTACCATGCCGGGCTTTATCGATAGCGGGACA GCGAGCTATTTCTTTCCGGACGACGGCAGCATCCCAATCTGCTCCGATAACCGGAATTGGTATTGCCCGCCCTCGCCGAT TAGCGTGAACGTCGACGTCATCGCCGGCGACGCGAGCGTGGATCGCCCATCGTCGTATCGGCTATCAAGCTACGACAGTA TTTCCGCGGACATGGAGGTCGCGCCGACTGGGGAAAGCGGCTCCGTGTTCAACGATGGCGCTTCTTGGTATGTGCTCGGC CTGCCGTTCTATATCAATCGCCGCGTCTATGGGTCAATTCAGCAGAGCGACAGCGACCCGATGTACTACGCGTTTTAG
Upstream 100 bases:
>100_bases TTCGACGATCCCCGGCGCGGGGCAGTACCCGCCCGCCGCTAGTGCCGATCCAACGTATATCGGTACCTATGCCGCAGTAG CCGGGAACAACGTGGTTCCG
Downstream 100 bases:
>100_bases AGACGGTTGCAGAACGGCTGTATGAACCGCGCCGAGTTTTGTGGAGGCTCCAACTCTTGAGGGAATGGAGCCATGAACAA ACAAGAAGCCGGGCAAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MYFESGNSPTYNSNIPYIDVQICVPGTSQCVRVDHVQVDSGSTGLRIMKSALNGLTLPLQANTSGAQISECMAYATSEVW GPVARSDVYVGGEFGGNQTLQVIDDSASASVPASCSSQGALTDTTSSFGGKGIIGINQLFSDGGSYYACTGTGCSQLDSS PVTVTNPVAGFAQDNNGVSIQIQPISDLGATSASGQLIFGINTASNNRIAGAAILYTDKNGDLSVNTGTRTMPGFIDSGT ASYFFPDDGSIPICSDNRNWYCPPSPISVNVDVIAGDASVDRPSSYRLSSYDSISADMEVAPTGESGSVFNDGASWYVLG LPFYINRRVYGSIQQSDSDPMYYAF
Sequences:
>Translated_345_residues MYFESGNSPTYNSNIPYIDVQICVPGTSQCVRVDHVQVDSGSTGLRIMKSALNGLTLPLQANTSGAQISECMAYATSEVW GPVARSDVYVGGEFGGNQTLQVIDDSASASVPASCSSQGALTDTTSSFGGKGIIGINQLFSDGGSYYACTGTGCSQLDSS PVTVTNPVAGFAQDNNGVSIQIQPISDLGATSASGQLIFGINTASNNRIAGAAILYTDKNGDLSVNTGTRTMPGFIDSGT ASYFFPDDGSIPICSDNRNWYCPPSPISVNVDVIAGDASVDRPSSYRLSSYDSISADMEVAPTGESGSVFNDGASWYVLG LPFYINRRVYGSIQQSDSDPMYYAF >Mature_345_residues MYFESGNSPTYNSNIPYIDVQICVPGTSQCVRVDHVQVDSGSTGLRIMKSALNGLTLPLQANTSGAQISECMAYATSEVW GPVARSDVYVGGEFGGNQTLQVIDDSASASVPASCSSQGALTDTTSSFGGKGIIGINQLFSDGGSYYACTGTGCSQLDSS PVTVTNPVAGFAQDNNGVSIQIQPISDLGATSASGQLIFGINTASNNRIAGAAILYTDKNGDLSVNTGTRTMPGFIDSGT ASYFFPDDGSIPICSDNRNWYCPPSPISVNVDVIAGDASVDRPSSYRLSSYDSISADMEVAPTGESGSVFNDGASWYVLG LPFYINRRVYGSIQQSDSDPMYYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36097; Mature: 36097
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFESGNSPTYNSNIPYIDVQICVPGTSQCVRVDHVQVDSGSTGLRIMKSALNGLTLPLQ CEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEE ANTSGAQISECMAYATSEVWGPVARSDVYVGGEFGGNQTLQVIDDSASASVPASCSSQGA CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCC LTDTTSSFGGKGIIGINQLFSDGGSYYACTGTGCSQLDSSPVTVTNPVAGFAQDNNGVSI EEECCCCCCCCEEEEHHHHHCCCCCEEEECCCCHHHCCCCCEEEECCCCCEEECCCCEEE QIQPISDLGATSASGQLIFGINTASNNRIAGAAILYTDKNGDLSVNTGTRTMPGFIDSGT EEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCCCCEECCCC ASYFFPDDGSIPICSDNRNWYCPPSPISVNVDVIAGDASVDRPSSYRLSSYDSISADMEV EEEECCCCCCEEEECCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCEEE APTGESGSVFNDGASWYVLGLPFYINRRVYGSIQQSDSDPMYYAF ECCCCCCCEECCCCCEEEEECCEEECCEEEEEEECCCCCCEEEEC >Mature Secondary Structure MYFESGNSPTYNSNIPYIDVQICVPGTSQCVRVDHVQVDSGSTGLRIMKSALNGLTLPLQ CEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEE ANTSGAQISECMAYATSEVWGPVARSDVYVGGEFGGNQTLQVIDDSASASVPASCSSQGA CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCC LTDTTSSFGGKGIIGINQLFSDGGSYYACTGTGCSQLDSSPVTVTNPVAGFAQDNNGVSI EEECCCCCCCCEEEEHHHHHCCCCCEEEECCCCHHHCCCCCEEEECCCCCEEECCCCEEE QIQPISDLGATSASGQLIFGINTASNNRIAGAAILYTDKNGDLSVNTGTRTMPGFIDSGT EEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEECCCCCCCCEECCCC ASYFFPDDGSIPICSDNRNWYCPPSPISVNVDVIAGDASVDRPSSYRLSSYDSISADMEV EEEECCCCCCEEEECCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCEEE APTGESGSVFNDGASWYVLGLPFYINRRVYGSIQQSDSDPMYYAF ECCCCCCCEECCCCCEEEEECCEEECCEEEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA