| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453259
Identifier: 126453259
GI number: 126453259
Start: 2033134
End: 2033277
Strand: Reverse
Name: 126453259
Synonym: BURPS1106A_2050
Alternate gene names: NA
Gene position: 2033277-2033134 (Counterclockwise)
Preceding gene: 126452099
Following gene: 126453729
Centisome position: 50.98
GC content: 65.97
Gene sequence:
>144_bases GTGCGCCTGGTACGCGAGCAGCGTAGCGAGCCCCCGTCGAAGTGGGCGGCAGTCGAATCGATTGCGCCGATGATCGGCTG CACGCCGCAGACGCTGTGGGATTGGGTCAAGCGCGACGAGCTCGACCGCCGTTTCAAGTCCTGA
Upstream 100 bases:
>100_bases AACCGCGCCGAGTTTTGTGGAGGCTCCAACTCTTGAGGGAATGGAGCCATGAACAAACAAGAAGCCGGGCAAGTTTTCCC CGGAAGTCCGGGAGCGCGCA
Downstream 100 bases:
>100_bases AGGCCTTCATTGATCAGCATCGCGCCCCCTTCGGGGGCGAGCCGATCTGCAAGGTCTTGCGGATTGCGCCGTCGGGCTAC CGACGCCATGCTGCGCAGTT
Product: transposase IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MRLVREQRSEPPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS
Sequences:
>Translated_47_residues MRLVREQRSEPPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS >Mature_47_residues MRLVREQRSEPPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 5602; Mature: 5602
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVREQRSEPPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS CCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLVREQRSEPPSKWAAVESIAPMIGCTPQTLWDWVKRDELDRRFKS CCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]