| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452092
Identifier: 126452092
GI number: 126452092
Start: 2415418
End: 2416182
Strand: Reverse
Name: 126452092
Synonym: BURPS1106A_2459
Alternate gene names: NA
Gene position: 2416182-2415418 (Counterclockwise)
Preceding gene: 126451471
Following gene: 126452461
Centisome position: 60.58
GC content: 69.8
Gene sequence:
>765_bases ATGGCGACACACCCGACCGGTACGCGCGACGAATGGCTCGCCGCGCGGCTCGAACTGCTCGATGCGGAAAAGGCGCACAC CCGGCGCGGCGACGCGCTCGCGCGGCAGCGCGCGGCGTTGCCGTGGGTGCGCGTCGACAAGGCGTACCGATTCGATACCG ACGAAGGCGGCGCGTCGCTCGCGGACCTGTTCCGCGGCCGCTCGCAACTGCTCGTCTACCACTTCATGTTCGGACCCGAC TACGCGGCGGGATGCCCGTCGTGCTCGGCGCTCGCGGACGGCTTCGACGGCTTCGTCGTCCATCTCGCGCATCACGACGT CACGCTCGCGGCGGTGTCGCGCGCGCCGCTCGCGAAGCTGCGGGCGTATCGCACGCGCATGGGATGGAGGTTCGCGTGGG CGTCGTCGCTCGACGGCGATTTCAACTACGACTTCAACGTGCCGTTTACCGAAGCGCAGCAGCGCGACGGCAGCGTCGAA TACAACTACCGGCGCGGCGGCCACGCGATGGATGTGACGCCCGCGCCTGCGCCCGTCGCCGGGTTCGCGGCCGATTGCGG GACCGATGCGCGCACGTACGCGCGCGATCGGCCGGGAATGAGCGCGTTCGTGCTCGAGGACGGCGCCGTCTATCACACGT ATTCGACGTACGCGCGCGGGCTGGACGGCCTCTGGGGCATGTACCAGTGGCTCGATCGCGCGCCGAAAGGGCGCAACGAA ACGGGCGTCTGGTGGCGTCGCCATGACGAGTACGACGGGCGCTGA
Upstream 100 bases:
>100_bases AGCCCGCGACTAATCTACCACCACGCGATCACACTCCCCGCGCGCCGGATCGCGGAACGATCGAGCGGCGCGCGACGCAG GCTAAAAGGAGGGACGACCG
Downstream 100 bases:
>100_bases AGGCGTGAGCCGGCATGGCCGGCGCGTTGCCGGGCGCGGCGTGCGGTGTCGCGCGGCGGGAGCGCGCGGCGACGCGTGGC ATGGCCGGCGCCCGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASLADLFRGRSQLLVYHFMFGPD YAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLAKLRAYRTRMGWRFAWASSLDGDFNYDFNVPFTEAQQRDGSVE YNYRRGGHAMDVTPAPAPVAGFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE TGVWWRRHDEYDGR
Sequences:
>Translated_254_residues MATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASLADLFRGRSQLLVYHFMFGPD YAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLAKLRAYRTRMGWRFAWASSLDGDFNYDFNVPFTEAQQRDGSVE YNYRRGGHAMDVTPAPAPVAGFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE TGVWWRRHDEYDGR >Mature_253_residues ATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASLADLFRGRSQLLVYHFMFGPDY AAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLAKLRAYRTRMGWRFAWASSLDGDFNYDFNVPFTEAQQRDGSVEY NYRRGGHAMDVTPAPAPVAGFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNET GVWWRRHDEYDGR
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28482; Mature: 28351
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASL CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHH ADLFRGRSQLLVYHFMFGPDYAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLAKL HHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEHHHHCHHHHH RAYRTRMGWRFAWASSLDGDFNYDFNVPFTEAQQRDGSVEYNYRRGGHAMDVTPAPAPVA HHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEEECCCCCCCCC GFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE CHHHHCCCCHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC TGVWWRRHDEYDGR CCCEEEECCCCCCC >Mature Secondary Structure ATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASL CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHH ADLFRGRSQLLVYHFMFGPDYAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLAKL HHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEHHHHCHHHHH RAYRTRMGWRFAWASSLDGDFNYDFNVPFTEAQQRDGSVEYNYRRGGHAMDVTPAPAPVA HHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEEECCCCCCCCC GFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE CHHHHCCCCHHHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC TGVWWRRHDEYDGR CCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA