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The map label for this gene is rnfH

Identifier: 126451471

GI number: 126451471

Start: 2419702

End: 2420025

Strand: Reverse

Name: rnfH

Synonym: BURPS1106A_2464

Alternate gene names: 126451471

Gene position: 2420025-2419702 (Counterclockwise)

Preceding gene: 126452126

Following gene: 126452092

Centisome position: 60.68

GC content: 70.06

Gene sequence:

>324_bases
ATGCCGAAGGTCCAGGTCTGCTATGCGCTGCCCGAGCGGCAGACGCTCGTCGCTGTCGACGTGCCGGCAGGAGCGAGCGT
GCGCGACGCGATCGCCGCGAGCGGCGTGCTCGCGCTGCATCCCGATATCGATGCCTCGGCGCTGAAGACGGGCATTTTCG
GCAAGCTCGCGCCGCTCGATGCGCCCGTCGCCGACGGCGATCGCGTCGAGATCTACCGGCCTCTGATCGTCGACCCGAAG
CTCGCGCGGCAGCGCCGCGTCGACAAGACCCGCCGCGAGGGCTCGATCGAGGGCCGCAAGTGGCTGCCGAAGGATTCGCG
CTGA

Upstream 100 bases:

>100_bases
TCGAGAAGATCATCGGCCCCGTGTTCACGCACATCGCGAATACGTTCGTCGAATCGTTCGTGAAGCGCGCCGATCAGCGC
TACGGCAAGGGGTGACGCGT

Downstream 100 bases:

>100_bases
GCGGCGCGCGGCGCGCGGCGCGGGCGTTGACGGACGCCGGACGTCGGACGCAATCGGCCCGCGCGTCGCTGCCGAAGCGG
CCGGCGGCCGAGCGGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPKVQVCYALPERQTLVAVDVPAGASVRDAIAASGVLALHPDIDASALKTGIFGKLAPLDAPVADGDRVEIYRPLIVDPK
LARQRRVDKTRREGSIEGRKWLPKDSR

Sequences:

>Translated_107_residues
MPKVQVCYALPERQTLVAVDVPAGASVRDAIAASGVLALHPDIDASALKTGIFGKLAPLDAPVADGDRVEIYRPLIVDPK
LARQRRVDKTRREGSIEGRKWLPKDSR
>Mature_106_residues
PKVQVCYALPERQTLVAVDVPAGASVRDAIAASGVLALHPDIDASALKTGIFGKLAPLDAPVADGDRVEIYRPLIVDPKL
ARQRRVDKTRREGSIEGRKWLPKDSR

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=87, Percent_Identity=54.0229885057471, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_BURM9 (A2SB99)

Other databases:

- EMBL:   CP000546
- RefSeq:   YP_001029218.1
- ProteinModelPortal:   A2SB99
- SMR:   A2SB99
- GeneID:   4791902
- GenomeReviews:   CP000546_GR
- KEGG:   bml:BMA10229_A3282
- TIGR:   BMA10229_A3282
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- PhylomeDB:   A2SB99
- ProtClustDB:   CLSK930841
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 11625; Mature: 11493

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVQVCYALPERQTLVAVDVPAGASVRDAIAASGVLALHPDIDASALKTGIFGKLAPLD
CCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCCCHHHHHHCCCCCCCCCC
APVADGDRVEIYRPLIVDPKLARQRRVDKTRREGSIEGRKWLPKDSR
CCCCCCCEEEEECCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKVQVCYALPERQTLVAVDVPAGASVRDAIAASGVLALHPDIDASALKTGIFGKLAPLD
CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCCCHHHHHHCCCCCCCCCC
APVADGDRVEIYRPLIVDPKLARQRRVDKTRREGSIEGRKWLPKDSR
CCCCCCCEEEEECCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA