| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452059
Identifier: 126452059
GI number: 126452059
Start: 756823
End: 757530
Strand: Direct
Name: 126452059
Synonym: BURPS1106A_0777
Alternate gene names: NA
Gene position: 756823-757530 (Clockwise)
Preceding gene: 126452451
Following gene: 126452147
Centisome position: 18.98
GC content: 73.31
Gene sequence:
>708_bases ATGGACGATTATTTTCGCGATCGCGTCGATGCCGGCCGGCAGCTCGCCGCGCATCTCGCCGATTATGCGAATCGCGACGA CGTCGTCGTGCTCGCGCTGCCGCGCGGCGGCGTGCCGGTCGCGTTCGAAGTCGCGAAGGCGCTGCGCGTGACGCTCGACG TGCTGATCGTGAGGAAGCTCGGCGCGCCCGGCAATCCGGAGCTCGCGATGGGCGCGATCGCGACGGGCGGCGTCGTGCTG CTCGAGCAATCGGTGCTGCGCGCGATGCGCGTGACCGAGCGCGAGCTCGCCGACACGATCGAGCGCGAACGCGACGAGCT CGCGCGGCGCGAAGCCGCGTATCGCGGCGATCGCGCGCCGCCCGCGCTCGACGGGCGAACCGTGATCGTCGTCGACGACG GCATCGCGACGGGCTCGACGATGCTCGCCGCGCTCGAAGCGGTGCGCGCGCACCGGCCCGCGAGGCTCGTCGCGGCGGTG CCCGTCGCATCGCCGAGCAGTGTGCGGAAGGTGGAGGCGGCGGCGGACGCGACCGTCTGCGTGATGCGCCCGGATGGGCT GATGGGCATCGGTCAGTTCTACCGGAATTTCGAGCAGACGAGCGACGACGAGGTGCGCGCGCTGCTCGCCCGCGCGCGCG AGTGGGCGCGGCCAAACGCGCCGGACGCGCCGGACGCGCCGCCCGCCGCGGCCGGCGGCGACGATTGA
Upstream 100 bases:
>100_bases CGCCGGCGCGCATCGCCGCCGCCCGACACGCGCCGGCCATGCGAGCCAACCTGTCGCGGCGCGGCGCAACCGCCGTTCGC GGCGCACTGAAGGAGGCGTG
Downstream 100 bases:
>100_bases CGATCGAGGGCGGCGGGCCGGGCCGCGCGCGGCCCGCCTGCGTGTGCTCAGCCGCGCTCGGCCGTCTGCGCGCTCGCGCC GTCCGTATTCGTTTCGTCCG
Product: phosphoribosyl transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MDDYFRDRVDAGRQLAAHLADYANRDDVVVLALPRGGVPVAFEVAKALRVTLDVLIVRKLGAPGNPELAMGAIATGGVVL LEQSVLRAMRVTERELADTIERERDELARREAAYRGDRAPPALDGRTVIVVDDGIATGSTMLAALEAVRAHRPARLVAAV PVASPSSVRKVEAAADATVCVMRPDGLMGIGQFYRNFEQTSDDEVRALLARAREWARPNAPDAPDAPPAAAGGDD
Sequences:
>Translated_235_residues MDDYFRDRVDAGRQLAAHLADYANRDDVVVLALPRGGVPVAFEVAKALRVTLDVLIVRKLGAPGNPELAMGAIATGGVVL LEQSVLRAMRVTERELADTIERERDELARREAAYRGDRAPPALDGRTVIVVDDGIATGSTMLAALEAVRAHRPARLVAAV PVASPSSVRKVEAAADATVCVMRPDGLMGIGQFYRNFEQTSDDEVRALLARAREWARPNAPDAPDAPPAAAGGDD >Mature_235_residues MDDYFRDRVDAGRQLAAHLADYANRDDVVVLALPRGGVPVAFEVAKALRVTLDVLIVRKLGAPGNPELAMGAIATGGVVL LEQSVLRAMRVTERELADTIERERDELARREAAYRGDRAPPALDGRTVIVVDDGIATGSTMLAALEAVRAHRPARLVAAV PVASPSSVRKVEAAADATVCVMRPDGLMGIGQFYRNFEQTSDDEVRALLARAREWARPNAPDAPDAPPAAAGGDD
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007815 - InterPro: IPR000836 [H]
Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 25069; Mature: 25069
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYFRDRVDAGRQLAAHLADYANRDDVVVLALPRGGVPVAFEVAKALRVTLDVLIVRKL CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH GAPGNPELAMGAIATGGVVLLEQSVLRAMRVTERELADTIERERDELARREAAYRGDRAP CCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PALDGRTVIVVDDGIATGSTMLAALEAVRAHRPARLVAAVPVASPSSVRKVEAAADATVC CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHCCCEEE VMRPDGLMGIGQFYRNFEQTSDDEVRALLARAREWARPNAPDAPDAPPAAAGGDD EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDYFRDRVDAGRQLAAHLADYANRDDVVVLALPRGGVPVAFEVAKALRVTLDVLIVRKL CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH GAPGNPELAMGAIATGGVVLLEQSVLRAMRVTERELADTIERERDELARREAAYRGDRAP CCCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PALDGRTVIVVDDGIATGSTMLAALEAVRAHRPARLVAAVPVASPSSVRKVEAAADATVC CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHCCCEEE VMRPDGLMGIGQFYRNFEQTSDDEVRALLARAREWARPNAPDAPDAPPAAAGGDD EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]