| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is secG [H]
Identifier: 126451944
GI number: 126451944
Start: 1270266
End: 1270643
Strand: Direct
Name: secG [H]
Synonym: BURPS1106A_1297
Alternate gene names: 126451944
Gene position: 1270266-1270643 (Clockwise)
Preceding gene: 126452700
Following gene: 126452694
Centisome position: 31.85
GC content: 67.46
Gene sequence:
>378_bases ATGCCGTATCTGAAAGTCTTGATCATTGTGGTTCAACTATTGTCTGCGCTCGGCGTGATCGGCCTCGTGTTGCTGCAGCA TGGCAAGGGCGCCGACATGGGCGCGGCGTTCGGCAGCGGCGCATCGGGCAGTCTGTTCGGTGCGACCGGTTCCGCGAATT TCCTGTCGCGCACGACGGCGGTTCTGGCCACGATCTTCTTCGTCGCGACGCTTGCGCTCACCTACCTCGGCTCGTATAAA TCGGCGCCGTCGGTCGGCGTGCTCGGCGCGGCGCCCGCGCCTGCCGCATCGGCGCCGGCCGCCTCGCAGACGCCTGCCGC GTCCGCGCCGGCTGCCGTGTCGGCCGCGTCTGCGCCGGGTCAGGATGTGCCGAAATAA
Upstream 100 bases:
>100_bases ATTTGCCGGGCGGCGCAGTAAGCGTTCGCGAGACGCGCGCGACGAATATCGGGGGCGGCCGGCAGGTGCGCCGGTTGCTT GAAACCAAACAGGTGAATGT
Downstream 100 bases:
>100_bases TTTTTAAAAAAGCACGTTTGTGCGTTGAACAATTCAGGGAACCGGGTTAGAATTTAATTCTTGAAGCGATTCGCGGGATG TGAGATTTCTTCCCGGGTTG
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPYLKVLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAVLATIFFVATLALTYLGSYK SAPSVGVLGAAPAPAASAPAASQTPAASAPAAVSAASAPGQDVPK
Sequences:
>Translated_125_residues MPYLKVLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAVLATIFFVATLALTYLGSYK SAPSVGVLGAAPAPAASAPAASQTPAASAPAAVSAASAPGQDVPK >Mature_124_residues PYLKVLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAVLATIFFVATLALTYLGSYKS APSVGVLGAAPAPAASAPAASQTPAASAPAAVSAASAPGQDVPK
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=118, Percent_Identity=43.2203389830509, Blast_Score=96, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 11999; Mature: 11868
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLKVLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH VLATIFFVATLALTYLGSYKSAPSVGVLGAAPAPAASAPAASQTPAASAPAAVSAASAPG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC QDVPK CCCCC >Mature Secondary Structure PYLKVLIIVVQLLSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH VLATIFFVATLALTYLGSYKSAPSVGVLGAAPAPAASAPAASQTPAASAPAAVSAASAPG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC QDVPK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]